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| bacteria:t3e:xopaj [2020/07/09 16:00] – old revision restored (2020/04/16 22:20) rkoebnik | bacteria:t3e:xopaj [2025/11/29 17:20] (current) – jfpothier | ||
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| - | ====== XopAJ ====== | + | ====== |
| - | Authors: Daiva Burokiene, Edyta Dermic, Dagmar Stehlikova, Mariya Stoyanova, Ralf Koebnik\\ | + | |
| - | Internal reviewer: | + | Authors: |
| - | Expert reviewer: | + | Internal reviewer: |
| + | Expert reviewer: | ||
| Class: XopAJ\\ | Class: XopAJ\\ | ||
| Family: XopAJ\\ | Family: XopAJ\\ | ||
| - | Prototype: | + | Prototype: AvrRxo1 (// |
| - | RefSeq ID: [[https:// | + | GenBank ID: [[https:// |
| - | 3D structure: | + | RefSeq ID: [[https:// |
| + | Synonym: AvrRxo1\\ | ||
| + | 3D structure: | ||
| ===== Biological function ===== | ===== Biological function ===== | ||
| === How discovered? === | === How discovered? === | ||
| + | |||
| + | Maize lines that contain the single dominant gene //Rxo1// exhibit a rapid hypersensitive response (HR) after infiltration with the nonhost rice bacterial streak pathogen // | ||
| === (Experimental) evidence for being a T3E === | === (Experimental) evidence for being a T3E === | ||
| + | |||
| + | When expressed in an //Xoo// //hrpC// mutant that is deficient in the type III secretion system, //avrRxo1// did not elicit the HR, indicating that the // | ||
| === Regulation === | === Regulation === | ||
| + | |||
| + | No data available. | ||
| === Phenotypes === | === Phenotypes === | ||
| + | |||
| + | * When introduced into //Xoo//, clones containing //avrRxo1// induced an HR on maize with //Rxo1//, but not on maize without //Rxo1// (Zhao //et al.//, 2004). | ||
| + | * //Rxo1// has a nucleotide-binding site-leucine-rich repeat structure, similar to many previously identified //R// genes (Zhao //et al.//, 2005). //Rxo1// functions after transfer as a transgene to rice, demonstrating the feasibility of nonhost //R// gene transfer between cereals (Zhao //et al.//, 2005; Xie //et al.//, 2007). | ||
| + | * AvrRxo1 is cytotoxic when expressed in yeast and caused chlorosis and patches of cell death in the infiltrated leaf areas upon transient expression in tomato and //Nicotiana benthamiana// | ||
| + | * Variants of AvrRxo1 were found to suppress the HR caused by the non-host resistance recognition of //Xoo// by //N. benthamiana// | ||
| + | * Among four //avrRxo1// alleles from different //Xoc// strains, toxicity is abolished by a single amino acid substitution at residue 344 in two AvrRxo1 variants (Liu //et al.//, 2014). | ||
| + | * The ATP/GTP binding site motif A and the NLS are required for both the avirulence activity and the suppression of non-host resistance (Liu //et al.//, 2014). | ||
| + | * AvrRxo1 has a T4 polynucleotide kinase domain and a structure homologous to that of Zeta toxins, and expression of AvrRxo1 suppresses bacterial growth in a manner dependent on the kinase motif (Han //et al.//, 2015). | ||
| + | * The gene product of the adjacent gene, AvrRxo1-ORF2 aka Arc1, suppresses the bacteriostatic activity of AvrRxo1 in bacterial cells (Han //et al.//, 2015). | ||
| + | * AvrRxo1 and its binding partner Arc1 function as a toxin-antitoxin system when expressed in // | ||
| + | * XopAJ< | ||
| + | * AvrRxo1 is a kinase that converts NAD to 3' | ||
| + | * AvrRxo1 targets the cysteine protease RD21A, which is required for drought-induced immunity (Liu //et al.//, 2020). | ||
| + | * AvrRxo1 enhances //Xoc// virulence and inhibits stomatal immunity by targeting and degrading rice OsPDX1 (pyridoxal phosphate synthase), thereby reducing vitamin B6 (VB6) levels in rice (Liu //et al.//, 2022). | ||
| === Localization === | === Localization === | ||
| + | |||
| + | Transient expression of //avrRxo1// in onion cells after biolistic delivery revealed that the protein product was associated with the plasma membrane (Zhao //et al.//, 2004). However, later studies using fluorescently-tagged AvrRxo1 indicate localization in the nucleus and cytoplasm as well (Liu //et al//., 2014, Triplett //et al.//, 2016, Liu //et al.//, 2020). | ||
| === Enzymatic function === | === Enzymatic function === | ||
| + | |||
| + | AvrRxo1 has a T4 polynucleotide kinase domain (Han //et al.//, 2015; Wu //et al//., 2015). AvrRxo1 is an ATP-dependent protease (Liu //et al.//, 2022). | ||
| + | |||
| + | AvrRxo1 is a phosphotransferase that produces two novel metabolites by phosphorylating nicotinamide/ | ||
| + | |||
| + | AvrRxo1 phosphorylates NAD //in planta//, and its kinase catalytic sites are necessary for toxicity, suppression of PAMP-triggered immunity, and activation of Rxo1-mediated resistance (Shidore //et al.//, 2017). In a metabolomic profile, 3' | ||
| === Interaction partners === | === Interaction partners === | ||
| + | |||
| + | Molecular modeling was used to decipher structural mechanisms of AvrRxo1-Rxo1 interaction (Bahadur & Basak, 2014). | ||
| + | |||
| + | The gene product of the adjacent gene, AvrRxo1-ORF2 aka Arc1, binds AvrRxo1, but binding is structurally different from typical effector-binding chaperones, in that it has a distinct fold containing a novel kinase-binding domain (Han //et al.//, 2015). | ||
| + | |||
| + | AvrRxo1 interacts with the // | ||
| + | |||
| + | AvrRxo1 interacts with OsPDX1.2 in a yeast two-hybrid assay and in planta, as assessed by split YFP and coIP assays (Liu //et al.//, 2022). | ||
| ===== Conservation ===== | ===== Conservation ===== | ||
| === In xanthomonads === | === In xanthomonads === | ||
| - | Yes (e.g. // | + | |
| + | Yes (e.g. //X. alfalfae//, //X. axonopodis//, | ||
| + | |||
| + | AvrRxo1 appears to be widely conserved in Asian strains of //Xoc// but much less present in African strains, which implies that deployment of // | ||
| + | |||
| + | AvrRxo1 is conserved in nearly all strains of //X. euvesicatoria//, | ||
| === In other plant pathogens/ | === In other plant pathogens/ | ||
| - | Yes (// | + | |
| + | Yes (// | ||
| + | |||
| + | Homologs of the // | ||
| + | |||
| + | ===== Conservation ===== | ||
| + | |||
| + | === In xanthomonads === | ||
| + | |||
| + | Yes (e.g. //X. alfalfae//, //X. axonopodis//, | ||
| + | |||
| + | AvrRxo1 appears to be widely conserved in Asian strains of //Xoc// but much less present in African strains, which implies that deployment of // | ||
| + | |||
| + | AvrRxo1 is conserved in nearly all strains of //X. euvesicatoria//, | ||
| + | |||
| + | === In other plant pathogens/ | ||
| + | |||
| + | Yes (// | ||
| + | |||
| + | Homologs of the // | ||
| ===== References ===== | ===== References ===== | ||
| - | Bahadur RP, Basak J (2014). Molecular modeling of protein-protein interaction to decipher the structural mechanism of nonhost resistance in rice. J. Biomol. Struct. Dyn. 32(4): 669-681. DOI: [[https:// | + | Bahadur RP, Basak J (2014). Molecular modeling of protein-protein interaction to decipher the structural mechanism of nonhost resistance in rice. J. Biomol. Struct. Dyn. 32: 669-681. DOI: [[https:// |
| + | |||
| + | Han Q, Zhou C, Wu S, Liu Y, Triplett L, Miao J, Tokuhisa J, Deblais L, Robinson H, Leach JE, Li J, Zhao B (2015). Crystal structure of // | ||
| + | |||
| + | Liu H, Chang Q, Feng W, Zhang B, Wu T, Li N, Yao F, Ding X, Chu Z (2014). Domain dissection of AvrRxo1 for suppressor, avirulence and cytotoxicity functions. PLoS One 9: e113875. DOI: [[https:// | ||
| + | |||
| + | Liu H, Lu C, Li Y, Wu T, Zhang B, Liu B, Feng W, Xu Q, Dong H, He S, Chu Z, Ding X (2022). The bacterial effector AvrRxo1 inhibits vitamin B6 biosynthesis to promote infection in rice. Plant Commun. 3: 100324. DOI: [[https:// | ||
| + | |||
| + | Liu Y, Wang K, Cheng Q, Kong D, Zhang X, Wang Z, Wang Q, Qi X, Yan J, Chu J, Ling H, Li Q, Miao J, Zhao B (2020). Cysteine protease RD21A regulated by E3 ligase SINAT4 is required for drought-induced resistance to // | ||
| - | Han Q, Zhou C, Wu S, Liu Y, Triplett L, Miao J, Tokuhisa J, Deblais L, Robinson H, Leach JE, Li J, Zhao B (2015). Crystal structure of // | + | Popov G, Fraiture M, Brunner F, Sessa G (2016). Multiple |
| - | Ji ZY, Xiong L, Zou LF, Li YR, Ma WX, Liu L, Zakria M, Ji GH, Chen GY (2014). AvrXa7-Xa7 mediated defense in rice can be suppressed by transcriptional activator-like effectors TAL6 and TAL11a from // | + | Salomon D, Dar D, Sreeramulu S, Sessa G (2011). Expression of // |
| - | Liu H, Chang Q, Feng W, Zhang B, Wu T, Li N, Yao F, Ding X, Chu Z (2014). Domain dissection of AvrRxo1 | + | Schuebel F, Rocker A, Edelmann D, Schessner J, Brieke C, Meinhart A (2016). 3' |
| - | Popov G, Fraiture M, Brunner F, Sessa G (2016). Multiple | + | Shidore T, Broeckling CD, Kirkwood JS, Long JJ, Miao J, Zhao B, Leach JE, Triplett LR (2017). The effector AvrRxo1 phosphorylates NAD //in planta//. PLoS Pathog. 13: e1006442. DOI: [[https:// |
| - | Salomon D, Dar D, Sreeramulu | + | Triplett LR, Shidore T, Long J, Miao J, Wu S, Han Q, Zhou C, Ishihara H, Li J, Zhao B, Leach JE (2016). AvrRxo1 Is a bifunctional |
| - | Schuebel F, Rocker A, Edelmann D, Schessner J, Brieke | + | Wonni I, Cottyn B, Detemmerman L, Dao S, Ouedraogo L, Sarra S, Tekete |
| - | Shidore T, Broeckling CD, Kirkwood JS, Long JJ, Miao J, Zhao B, Leach JE, Triplett LR (2017). The effector | + | Wu S (2015). Structural and functional characterization of a // |
| - | Triplett LR, Shidore T, Long J, Miao J, Wu S, Han Q, Zhou C, Ishihara H, Li J, Zhao B, Leach JE (2016). AvrRxo1 Is a bifunctional type III secreted effector and toxin-antitoxin system component with homologs in diverse environmental contexts. PLoS One 11(7): e0158856. DOI: [[https:// | + | Xie XW, Yu J, Xu JL, Zhou YL, Li ZK (2007). Introduction of a non-host gene //Rxo1// cloned from maize resistant to rice bacterial leaf streak into rice varieties. Sheng Wu Gong Cheng Xue Bao [Chinese J. Biotechnol.] 23: 607-611. DOI: [[https:// |
| - | Wonni I, Cottyn | + | Zhao B, Ardales EY, Raymundo A, Bai J, Trick HN, Leach JE, Hulbert SH (2004). The //avrRxo1// gene from the rice pathogen |
| - | Xie XW, Yu J, Xu JL, Zhou YL, Li ZK (2007). Introduction of a non-host | + | Zhao B, Lin X, Poland |
| - | Zhao B, Ardales EY, Raymundo A, Bai J, Trick HN, Leach JE, Hulbert SH (2004). The //avrRxo1// gene from the rice pathogen // | + | ===== Acknowledgements ===== |
| - | Zhao B, Lin X, Poland J, Trick H, Leach J, Hulbert S (2005). A maize resistance gene functions against bacterial streak disease | + | This fact sheet is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation |