typing:molecular_typing
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| typing:molecular_typing [2025/02/14 15:54] – [References] rkoebnik | typing:molecular_typing [2025/07/21 14:03] (current) – [Table] rkoebnik | ||
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| This data is based on the review by [[https:// | This data is based on the review by [[https:// | ||
| - | **Tools for molecular typing of regulated | + | **Tools for molecular typing of regulated |
| - | ^ Pathogen | + | ^ Pathogen |
| - | | **A1 list** | + | | **A1 list** |
| - | | //X. citri// pv. // | + | | //X. citri// pv. // |
| - | | //X. citri// pv. // | + | | //X. citri// pv. // |
| - | | //X. euvesicatoria// | + | | //X. euvesicatoria// |
| - | | //X. oryzae// pv. // | + | | //X. oryzae// pv. // |
| - | | //X. oryzae// pv. // | + | | //X. oryzae// pv. // |
| - | | **A2 list** | + | | **A2 list** |
| - | | //X. arboricola// | + | | //X. arboricola// |
| - | | //X. arboricola// | + | | //X. arboricola// |
| - | | //X. arboricola// | + | | //X. arboricola// |
| - | | //X. axonopodis// | + | | //X. axonopodis// |
| - | | //X. euvesicatoria// | + | | //X. euvesicatoria// |
| - | | //X. euvesicatoria// | + | | //X. euvesicatoria// |
| - | | //X. fragariae// | + | | //X. fragariae// |
| - | | //X. hortorum// pv. // | + | | //X. hortorum// pv. // |
| - | | //X. phaseoli// pv. // | + | | //X. phaseoli// pv. // |
| - | | //X. phaseoli// pv. // | + | | //X. phaseoli// pv. // |
| - | | //X. translucens// | + | | //X. translucens// |
| - | | //X. vesicatoria// | + | | //X. vesicatoria// |
| - | | //Xylella fastidiosa// | + | | //Xylella fastidiosa// |
| + | | **Other** | ||
| + | | //X. phaseoli// pv. // | ||
| < | < | ||
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| Almeida RP, Nascimento FE, Chau J, Prado SS, Tsai CW, Lopes SA, Lopes JR (2008). Genetic structure and biology of //Xylella fastidiosa// | Almeida RP, Nascimento FE, Chau J, Prado SS, Tsai CW, Lopes SA, Lopes JR (2008). Genetic structure and biology of //Xylella fastidiosa// | ||
| + | |||
| + | Arrieta-Ortiz ML, Rodríguez-R LM, Pérez-Quintero Á, Poulin L, Díaz AC, Arias Rojas N, Trujillo C, Restrepo Benavides M, Bart R, Boch J, Boureau T, Darrasse A, David P, Dugé de Bernonville T, Fontanilla P, Gagnevin L, Guérin F, Jacques MA, Lauber E, Lefeuvre P, Medina C, Medina E, Montenegro N, Muñoz Bodnar A, Noël LD, Ortiz Quiñones JF, Osorio D, Pardo C, Patil PB, Poussier S, Pruvost O, Robène-Soustrade I, Ryan RP, Tabima J, Urrego Morales OG, Vernière C, Carrere S, Verdier V, Szurek B, Restrepo S, López C, Koebnik R, Bernal A (2013). Genomic survey of pathogenicity determinants and VNTR markers in the cassava bacterial pathogen // | ||
| Bellanger N, Dereeper A, Koebnik R (2022). Clustered regularly interspaced short palindromic repeats in // | Bellanger N, Dereeper A, Koebnik R (2022). Clustered regularly interspaced short palindromic repeats in // | ||
| - | Boudon S, Manceau C, Nottéghem JL (2005). Structure and origin of // | + | Boudon S, Manceau C, Nottéghem JL (2005). Structure and origin of // |
| Bragard C, Singer E, Alizadeh A, Vauterin L, Maraite H, Swings J (1997). // | Bragard C, Singer E, Alizadeh A, Vauterin L, Maraite H, Swings J (1997). // | ||
| - | Bui Thi Ngoc L, Vernière C, Jouen E, Ah-You N, Lefeuvre P, Chiroleu F, Gagnevin L, Pruvost O. (2010). Amplified fragment length polymorphism and multilocus sequence analysis-based genotypic relatedness among pathogenic variants of // | + | Bui Thi Ngoc L, Vernière C, Jouen E, Ah-You N, Lefeuvre P, Chiroleu F, Gagnevin L, Pruvost O. (2010). Amplified fragment length polymorphism and multilocus sequence analysis-based genotypic relatedness among pathogenic variants of // |
| - | Bui Thi Ngoc L, Verniere C, Vital K, Guerin F, Gagnevin L, Brisse S, Ah-You N, Pruvost O (2009). Development of 14 minisatellite markers for the citrus canker bacterium, // | + | Bui Thi Ngoc L, Verniere C, Vital K, Guerin F, Gagnevin L, Brisse S, Ah-You N, Pruvost O (2009). Development of 14 minisatellite markers for the citrus canker bacterium, // |
| Catara V, Cubero J, Pothier JF, Bosis E, Bragard C, Đermić E, Holeva MC, Jacques MA, Petter F, Pruvost O, Robène I, Studholme DJ, Tavares F, Vicente JG, Koebnik R, Costa J (2021). Trends in molecular diagnosis and diversity studies for phytosanitary regulated // | Catara V, Cubero J, Pothier JF, Bosis E, Bragard C, Đermić E, Holeva MC, Jacques MA, Petter F, Pruvost O, Robène I, Studholme DJ, Tavares F, Vicente JG, Koebnik R, Costa J (2021). Trends in molecular diagnosis and diversity studies for phytosanitary regulated // | ||
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| Curland RD, Gao L, Hirsch CD, Ishimaru CA (2020). Localized genetic and phenotypic diversity of // | Curland RD, Gao L, Hirsch CD, Ishimaru CA (2020). Localized genetic and phenotypic diversity of // | ||
| + | |||
| + | De Oliveira LB, De Oliveira SAS, Moreira RFC, Diamantino MSAS, De Souza Ramos AP, Soares TL, Ferreira CF (2023). Genetic diversity of // | ||
| Dhakal U, Dobhal S, Alvarez AM, Arif M (2019). Phylogenetic analyses of xanthomonads causing bacterial leaf spot of tomato and pepper: // | Dhakal U, Dobhal S, Alvarez AM, Arif M (2019). Phylogenetic analyses of xanthomonads causing bacterial leaf spot of tomato and pepper: // | ||
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| Diallo A, Wonni I, Sicard A, Blondin L, Gagnevin L, Vernière C, Szurek B, Hutin M (2023). Genetic structure and TALome analysis highlight a high level of diversity in Burkinabe // | Diallo A, Wonni I, Sicard A, Blondin L, Gagnevin L, Vernière C, Szurek B, Hutin M (2023). Genetic structure and TALome analysis highlight a high level of diversity in Burkinabe // | ||
| - | Donahoo RS, Jones JB, Lacy GH, Stromberg VK, Norman DJ (2013). Genetic analyses of // | + | Donahoo RS, Jones JB, Lacy GH, Stromberg VK, Norman DJ (2013). Genetic analyses of // |
| Dupas E, Durand K, Rieux A, Briand M, Pruvost O, Cunty A, Denancé N, Donnadieu C, Legendre B, Lopez-Roques C, Cesbron S, Ravigné V, Jacques MA (2023). Suspicions of two bridgehead invasions of //Xylella fastidiosa// | Dupas E, Durand K, Rieux A, Briand M, Pruvost O, Cunty A, Denancé N, Donnadieu C, Legendre B, Lopez-Roques C, Cesbron S, Ravigné V, Jacques MA (2023). Suspicions of two bridgehead invasions of //Xylella fastidiosa// | ||
| - | Escalon A, Javegny S, Vernière C, Noël LD, Vital K, Poussier S, Hajri A, Boureau T, Pruvost O, Arlat M, Gagnevin L (2013). Variations in type III effector repertoires, | + | Escalon A, Javegny S, Vernière C, Noël LD, Vital K, Poussier S, Hajri A, Boureau T, Pruvost O, Arlat M, Gagnevin L (2013). Variations in type III effector repertoires, |
| Essakhi S, Cesbron S, Fischer-Le Saux M, Bonneau S, Jacques MA, Manceau C (2015). Phylogenetic and variable-number tandem-repeat analyses identify nonpathogenic // | Essakhi S, Cesbron S, Fischer-Le Saux M, Bonneau S, Jacques MA, Manceau C (2015). Phylogenetic and variable-number tandem-repeat analyses identify nonpathogenic // | ||
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| Fischer-Le Saux M, Bonneau S, Essakhi S, Manceau C, Jacques MA (2015). Aggressive emerging pathovars of // | Fischer-Le Saux M, Bonneau S, Essakhi S, Manceau C, Jacques MA (2015). Aggressive emerging pathovars of // | ||
| - | Gent DH, Al-Saadi A, Gabriel DW, Louws FJ, Ishimaru CA, Schwartz HF (2005). Pathogenic and genetic relatedness among // | + | Gent DH, Al-Saadi A, Gabriel DW, Louws FJ, Ishimaru CA, Schwartz HF (2005). Pathogenic and genetic relatedness among // |
| Gent DH, Schwartz HF, Ishimaru CA, Louws FJ, Cramer RA, Lawrence CB (2004). Polyphasic characterization of // | Gent DH, Schwartz HF, Ishimaru CA, Louws FJ, Cramer RA, Lawrence CB (2004). Polyphasic characterization of // | ||
| - | George ML, Bustamam M, Cruz WT, Leach JE, Nelson RJ (1997). Movement of // | + | George ML, Bustamam M, Cruz WT, Leach JE, Nelson RJ (1997). Movement of // |
| Gétaz M, Krijger M, Rezzonico F, Smits THM, van der Wolf JM, Pothier JF (2018). Genome-based population structure analysis of the strawberry plant pathogen // | Gétaz M, Krijger M, Rezzonico F, Smits THM, van der Wolf JM, Pothier JF (2018). Genome-based population structure analysis of the strawberry plant pathogen // | ||
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| Hajri A, Brin C, Zhao S, David P, Feng JX, Koebnik R, Szurek B, Verdier V, Boureau T, Poussier S (2012). Multilocus sequence analysis and type III effector repertoire mining provide new insights into the evolutionary history and virulence of // | Hajri A, Brin C, Zhao S, David P, Feng JX, Koebnik R, Szurek B, Verdier V, Boureau T, Poussier S (2012). Multilocus sequence analysis and type III effector repertoire mining provide new insights into the evolutionary history and virulence of // | ||
| - | Hajri A, Meyer D, Delort F, Guillaumès J, Brin C, Manceau C (2010). Identification of a genetic lineage within // | + | Hajri A, Meyer D, Delort F, Guillaumès J, Brin C, Manceau C (2010). Identification of a genetic lineage within // |
| Hamza AA, Robène-Soustrade I, Jouen E, Gagnevin L, Lefeuvre P, Chiroleu F, Pruvost O (2010). Genetic and pathological diversity among // | Hamza AA, Robène-Soustrade I, Jouen E, Gagnevin L, Lefeuvre P, Chiroleu F, Pruvost O (2010). Genetic and pathological diversity among // | ||
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| Jacques MA, Denancé N, Legendre B, Morel E, Briand M, Mississipi S, Durand K, Olivier V, Portier P, Poliakoff F, Crouzillat D (2015). New coffee plant-infecting //Xylella fastidiosa// | Jacques MA, Denancé N, Legendre B, Morel E, Briand M, Mississipi S, Durand K, Olivier V, Portier P, Poliakoff F, Crouzillat D (2015). New coffee plant-infecting //Xylella fastidiosa// | ||
| - | Jeong K, Muñoz-Bodnar A, Arias Rojas N, Poulin L, Rodriguez-R LM, Gagnevin L, Vernière C, Pruvost O, Koebnik R (2019). CRISPR elements provide a new framework for the genealogy of the citrus canker pathogen // | + | Jeong K, Muñoz-Bodnar A, Arias Rojas N, Poulin L, Rodriguez-R LM, Gagnevin L, Vernière C, Pruvost O, Koebnik R (2019). CRISPR elements provide a new framework for the genealogy of the citrus canker pathogen // |
| Kahn AK, Almeida RPP (2022). Phylogenetics of historical host switches in a bacterial plant pathogen. Appl. Environ. Microbiol. 88: e0235621. DOI: [[https:// | Kahn AK, Almeida RPP (2022). Phylogenetics of historical host switches in a bacterial plant pathogen. Appl. Environ. Microbiol. 88: e0235621. DOI: [[https:// | ||
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| Khojasteh M, Taghavi SM, Khodaygan P, Hamzehzarghani H, Chen G, Bragard C, Koebnik R, Osdaghi E (2019). Molecular typing reveals high genetic diversity of // | Khojasteh M, Taghavi SM, Khodaygan P, Hamzehzarghani H, Chen G, Bragard C, Koebnik R, Osdaghi E (2019). Molecular typing reveals high genetic diversity of // | ||
| - | Khoodoo MHR, Jaufeerally-Fakim Y (2004). RAPD-PCR fingerprinting and Southern analysis of // | + | Khoodoo MHR, Jaufeerally-Fakim Y (2004). RAPD-PCR fingerprinting and Southern analysis of // |
| Landa BB, Castillo AI, Giampetruzzi A, Kahn A, Román-Écija M, Velasco-Amo MP, Navas-Cortés JA, Marco-Noales E, Barbé S, Moralejo E, Coletta-Filho HD, Saldarelli P, Saponari M, Almeida RPP (2020). Emergence of a plant pathogen in Europe associated with multiple intercontinental introductions. Appl. Environ. Microbiol. 86: e01521-19. DOI: [[https:// | Landa BB, Castillo AI, Giampetruzzi A, Kahn A, Román-Écija M, Velasco-Amo MP, Navas-Cortés JA, Marco-Noales E, Barbé S, Moralejo E, Coletta-Filho HD, Saldarelli P, Saponari M, Almeida RPP (2020). Emergence of a plant pathogen in Europe associated with multiple intercontinental introductions. Appl. Environ. Microbiol. 86: e01521-19. DOI: [[https:// | ||
| - | Leduc A, Traoré YN, Boyer K, Magne M, Grygiel P, Juhasz CC, Boyer C, Guerin F, Wonni I, Ouedraogo L, Vernière C, Ravigné V, Pruvost O (2015). Bridgehead invasion of a monomorphic plant pathogenic bacterium: // | + | Leduc A, Traoré YN, Boyer K, Magne M, Grygiel P, Juhasz CC, Boyer C, Guerin F, Wonni I, Ouedraogo L, Vernière C, Ravigné V, Pruvost O (2015). Bridgehead invasion of a monomorphic plant pathogenic bacterium: // |
| - | Loreti S, Gallelli A, Belisario A, Wajnberg E, Corazza L (2001). Investigation of genomic variability of // | + | Loreti S, Gallelli A, Belisario A, Wajnberg E, Corazza L (2001). Investigation of genomic variability of // |
| Marcelletti S, Scortichini M (2016). Genome-wide comparison and taxonomic relatedness of multiple //Xylella fastidiosa// | Marcelletti S, Scortichini M (2016). Genome-wide comparison and taxonomic relatedness of multiple //Xylella fastidiosa// | ||
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| Mazzaglia A, Rahi YJ, Taratufolo MC, Tatì M, Turco S, Ciarroni S, Tagliavento V, Valentini F, D' | Mazzaglia A, Rahi YJ, Taratufolo MC, Tatì M, Turco S, Ciarroni S, Tagliavento V, Valentini F, D' | ||
| - | Mhedbi-Hajri N, Hajri A, Boureau T, Darrasse A, Durand K, Brin C, Fischer-Le Saux M, Manceau C, Poussier S, Pruvost O, Lemaire C, Jacques MA (2013). Evolutionary history of the plant pathogenic bacterium // | + | Mhedbi-Hajri N, Hajri A, Boureau T, Darrasse A, Durand K, Brin C, Fischer-Le Saux M, Manceau C, Poussier S, Pruvost O, Lemaire C, Jacques MA (2013). Evolutionary history of the plant pathogenic bacterium // |
| - | Mkandawire AB, Mabagala RB, Guzmán P, Gepts P, Gilbertson RL (2004). Genetic diversity and pathogenic variation of common blight bacteria (// | + | Mkandawire AB, Mabagala RB, Guzmán P, Gepts P, Gilbertson RL (2004). Genetic diversity and pathogenic variation of common blight bacteria (// |
| Montero-Astúa M, Hartung JS, Aguilar E, Chacón C, Li W, Albertazzi FJ, Rivera C (2007). Genetic diversity of //Xylella fastidiosa// | Montero-Astúa M, Hartung JS, Aguilar E, Chacón C, Li W, Albertazzi FJ, Rivera C (2007). Genetic diversity of //Xylella fastidiosa// | ||
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| Parker JK, Havird JC, De La Fuente L (2012). Differentiation of //Xylella fastidiosa// | Parker JK, Havird JC, De La Fuente L (2012). Differentiation of //Xylella fastidiosa// | ||
| - | Picard Y, Roumagnac P, Legrand D, Humeau L, Robène-Soustrade I, Chiroleu F, Gagnevin L, Pruvost O (2008). Polyphasic characterization of// Xanthomonas axonopodis// | + | Picard Y, Roumagnac P, Legrand D, Humeau L, Robène-Soustrade I, Chiroleu F, Gagnevin L, Pruvost O (2008). Polyphasic characterization of// Xanthomonas axonopodis// |
| Pooler MR, Ritchie DF, Hartung JS (1996). Genetic relationships among strains of // | Pooler MR, Ritchie DF, Hartung JS (1996). Genetic relationships among strains of // | ||
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| Poulin L, Grygiel P, Magne M, Gagnevin L, Rodriguez-R LM, Forero Serna N, Zhao S, El Rafii M, Dao S, Tekete C, Wonni I, Koita O, Pruvost O, Verdier V, Vernière C, Koebnik R (2015). New multilocus variable-number tandem-repeat analysis tool for surveillance and local epidemiology of bacterial leaf blight and bacterial leaf streak of rice caused by // | Poulin L, Grygiel P, Magne M, Gagnevin L, Rodriguez-R LM, Forero Serna N, Zhao S, El Rafii M, Dao S, Tekete C, Wonni I, Koita O, Pruvost O, Verdier V, Vernière C, Koebnik R (2015). New multilocus variable-number tandem-repeat analysis tool for surveillance and local epidemiology of bacterial leaf blight and bacterial leaf streak of rice caused by // | ||
| - | Pruvost O, Boyer K, Ravigné V, Richard D, Vernière C (2019). Deciphering how plant pathogenic bacteria disperse and meet: Molecular epidemiology of // | + | Pruvost O, Boyer K, Ravigné V, Richard D, Vernière C (2019). Deciphering how plant pathogenic bacteria disperse and meet: Molecular epidemiology of // |
| Pruvost O, Ibrahim YE, Sharafaddin AH, Boyer K, Widyawan A, Al-Saleh MA (2022). Molecular epidemiology of the citrus bacterial pathogen // | Pruvost O, Ibrahim YE, Sharafaddin AH, Boyer K, Widyawan A, Al-Saleh MA (2022). Molecular epidemiology of the citrus bacterial pathogen // | ||
| - | Pruvost O, Magne M, Boyer K, Leduc A, Tourterel C, Drevet C, Ravigné V, Gagnevin L, Guérin F, Chiroleu F, Koebnik R, Verdier V, Vernière C (2014). A MLVA genotyping scheme for global surveillance of the citrus pathogen // | + | Pruvost O, Magne M, Boyer K, Leduc A, Tourterel C, Drevet C, Ravigné V, Gagnevin L, Guérin F, Chiroleu F, Koebnik R, Verdier V, Vernière C (2014). A MLVA genotyping scheme for global surveillance of the citrus pathogen // |
| - | Pruvost O, Richard D, Boyer K, Javegny S, Boyer C, Chiroleu F, Grygiel P, Parvedy E, Robène I, Maillot-Lebon V, Hamza A, Lobin KK, Naiken M, Vernière C (2021). Diversity and geographical structure of // | + | Pruvost O, Richard D, Boyer K, Javegny S, Boyer C, Chiroleu F, Grygiel P, Parvedy E, Robène I, Maillot-Lebon V, Hamza A, Lobin KK, Naiken M, Vernière C (2021). Diversity and geographical structure of // |
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| + | Rache L, Blondin L, Diaz Tatis P, Flores C, Camargo A, Kante M, Wonni I, López C, Szurek B, Dupas S, Pruvost O, Koebnik R, Restrepo S, Bernal A, Vernière C (2023). A minisatellite-based MLVA for deciphering the global epidemiology of the bacterial cassava pathogen // | ||
| + | |||
| + | Rache L, Blondin L, Flores C, Trujillo C, Szurek B, Restrepo S, Koebnik R, Bernal A, Vernière C (2019). An optimized microsatellite scheme for assessing populations of // | ||
| Rademaker JL, Norman DJ, Forster RL, Louws FJ, Schultz MH, de Bruijn FJ (2006). Classification and identification of // | Rademaker JL, Norman DJ, Forster RL, Louws FJ, Schultz MH, de Bruijn FJ (2006). Classification and identification of // | ||
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| Rockey W, Potnis N, Timilsina S, Hong JC, Vallad GE, Jones JB, Norman DJ (2015). Multilocus sequence analysis reveals genetic diversity in xanthomonads associated with poinsettia production. Plant Dis. 99: 874-882. DOI: [[https:// | Rockey W, Potnis N, Timilsina S, Hong JC, Vallad GE, Jones JB, Norman DJ (2015). Multilocus sequence analysis reveals genetic diversity in xanthomonads associated with poinsettia production. Plant Dis. 99: 874-882. DOI: [[https:// | ||
| - | Sakthivel K, Kumar A, Gautam RK, Manigundan K, Laha GS, Velazhahan R, Singh R, Yadav IS (2021). Intra-regional diversity of rice bacterial blight pathogen, // | + | Sakthivel K, Kumar A, Gautam RK, Manigundan K, Laha GS, Velazhahan R, Singh R, Yadav IS (2021). Intra-regional diversity of rice bacterial blight pathogen, // |
| Scally M, Schuenzel EL, Stouthamer R, Nunney L (2005). Multilocus sequence type system for the plant pathogen //Xylella fastidiosa// | Scally M, Schuenzel EL, Stouthamer R, Nunney L (2005). Multilocus sequence type system for the plant pathogen //Xylella fastidiosa// | ||
| - | Scortichini M, Marchesi U, Di Prospero P (2001). Genetic diversity of // | + | Scortichini M, Marchesi U, Di Prospero P (2001). Genetic diversity of // |
| Siddique F, Xiaofeng X, Zhe N, Mingxiu Y, Dawei L, Yuting L, Naibo Y, Younis H, Niaz N, Junhua Z (2025). Genetic diversity and population structure of phyllosphere-associated // | Siddique F, Xiaofeng X, Zhe N, Mingxiu Y, Dawei L, Yuting L, Naibo Y, Younis H, Niaz N, Junhua Z (2025). Genetic diversity and population structure of phyllosphere-associated // | ||
| Timilsina S, Jibrin MO, Potnis N, Minsavage GV, Kebede M, Schwartz A, Bart R, Staskawicz B, Boyer C, Vallad GE, Pruvost O, Jones JB, Goss EM (2015). Multilocus sequence analysis of xanthomonads causing bacterial spot of tomato and pepper plants reveals strains generated by recombination among species and recent global spread of // | Timilsina S, Jibrin MO, Potnis N, Minsavage GV, Kebede M, Schwartz A, Bart R, Staskawicz B, Boyer C, Vallad GE, Pruvost O, Jones JB, Goss EM (2015). Multilocus sequence analysis of xanthomonads causing bacterial spot of tomato and pepper plants reveals strains generated by recombination among species and recent global spread of // | ||
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| + | Trujillo CA, Arias-Rojas N, Poulin L, Medina CA, Tapiero A, Restrepo S, Koebnik R, Bernal AJ (2014). Population typing of the causal agent of cassava bacterial blight in the Eastern Plains of Colombia using two types of molecular markers. BMC Microbiol. 14: 161. DOI: [[https:// | ||
| Vancheva T, Bogatzevska N, Moncheva P, Mitrev S, Vernière C, Koebnik R (2021). Molecular epidemiology of // | Vancheva T, Bogatzevska N, Moncheva P, Mitrev S, Vernière C, Koebnik R (2021). Molecular epidemiology of // | ||
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| Wei F, Liang X, Shi JC, Luo J, Qiu LJ, Li XX, Lu LJ, Wen Y, Feng J (2023). Pan-genomic analysis identifies the Chinese strain as a new subspecies of // | Wei F, Liang X, Shi JC, Luo J, Qiu LJ, Li XX, Lu LJ, Wen Y, Feng J (2023). Pan-genomic analysis identifies the Chinese strain as a new subspecies of // | ||
| - | Wonni I, Cottyn B, Detemmerman L, Dao S, Ouedraogo L, Sarra S, Tekete C, Poussier S, Corral R, Triplett L, Koita O, Koebnik R, Leach J, Szurek B, Maes M, Verdier V (2014). Analysis of // | + | Wonni I, Cottyn B, Detemmerman L, Dao S, Ouedraogo L, Sarra S, Tekete C, Poussier S, Corral R, Triplett L, Koita O, Koebnik R, Leach J, Szurek B, Maes M, Verdier V (2014). Analysis of // |
| Yuan X, Morano L, Bromley R, Spring-Pearson S, Stouthamer R, Nunney L (2010). Multilocus sequence typing of //Xylella fastidiosa// | Yuan X, Morano L, Bromley R, Spring-Pearson S, Stouthamer R, Nunney L (2010). Multilocus sequence typing of //Xylella fastidiosa// | ||
| - | Zhao S, Poulin L, Rodriguez-R LM, Serna NF, Liu SY, Wonni I, Szurek B, Verdier V, Leach JE, He YQ, Feng JX, Koebnik R (2012). Development of a variable number of tandem repeats typing scheme for the bacterial rice pathogen // | + | Zhao S, Poulin L, Rodriguez-R LM, Serna NF, Liu SY, Wonni I, Szurek B, Verdier V, Leach JE, He YQ, Feng JX, Koebnik R (2012). Development of a variable number of tandem repeats typing scheme for the bacterial rice pathogen // |
| ===== Further reading ===== | ===== Further reading ===== | ||
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| Nunney L, Elfekih S, Stouthamer R (2012). The importance of multilocus sequence typing: cautionary tales from the bacterium //Xylella fastidiosa// | Nunney L, Elfekih S, Stouthamer R (2012). The importance of multilocus sequence typing: cautionary tales from the bacterium //Xylella fastidiosa// | ||
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typing/molecular_typing.1739548453.txt.gz · Last modified: 2025/02/14 15:54 by rkoebnik
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