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plant:strawberry [2020/06/15 15:04] – [References] rkoebnikplant:strawberry [2025/05/12 08:11] (current) – [Resistance gene: FaRXf1] rkoebnik
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-====== Strawberry (//Fragaria vesca//, //F. ananassa//) ======+====== Plant Resistance Genes in Strawberry (//Fragaria vesca// L., //F. ananassa//) against //Xanthomonas// Infection ======
  
-Author: Inga Moročko-Bičevska (Joël F. Pothier)\\ +Author: [[https://www.researchgate.net/profile/Inga_Morocko-Bicevska2|Inga Moročko-Bičevska]] ([[https://www.researchgate.net/profile/Joel_Pothier2|Joël F. Pothier]])\\ 
-Internal reviewer: Giusy D'Attoma\\ +Internal reviewer: [[https://www.researchgate.net/profile/Giusy_Dattoma|Giusy D'Attoma]]
-Expert reviewer: FIXME+
  
 ===== Pathogen: //Xanthomonas fragariae// ===== ===== Pathogen: //Xanthomonas fragariae// =====
  
-==== Resistance gene:   FaRXf1   ====+==== Resistance gene: FaRXf1 ====
  
 === Synonyms === === Synonyms ===
  
-//NA// +FaRGA3 (Kim //et al.//, 2025)
 === Source === === Source ===
  
 Wild accessions US4808 (native //Fragaria virginiana// clone SG-89 from Minesota) and US4809 (hybrid between //F. virginiana// clone SG-26 from Georgia and //F. x ananassa// ‘Earliglow’) (Maas //et al.//, 2002; Hartung //et al.//, 2003; Roach //et al.//, 2016). Wild accessions US4808 (native //Fragaria virginiana// clone SG-89 from Minesota) and US4809 (hybrid between //F. virginiana// clone SG-26 from Georgia and //F. x ananassa// ‘Earliglow’) (Maas //et al.//, 2002; Hartung //et al.//, 2003; Roach //et al.//, 2016).
- 
 === Status (identified, mapped, cloned, sequenced) === === Status (identified, mapped, cloned, sequenced) ===
  
 QTL mapped on linkage group 6D (Roach //et al.//, 2016). QTL mapped on linkage group 6D (Roach //et al.//, 2016).
- 
 === Molecular markers === === Molecular markers ===
  
 SNPs (Roach //et al.//, 2016). SNPs (Roach //et al.//, 2016).
- 
 === Brief description === === Brief description ===
  
-Accessions US4808 and US4809 were identified as resistant to the four genetic clades of //X. fragariae// (Maas //et al.//, 2002; Hartung //et al.//, 2003). Introgression of the trait into commercial quality perennial-type germplasm was initiated by Roach //et al.// (2016). Resistance detected in two wild accessions US4808 and US4809 was found to be highly heritable and controlled by a major locus //FaRXf1// on linkage group 6D (Roach //et al.//, 2016). Annotation of the //FaRXf1// region in //F. vesca// genome revealed the presence of several resistance-associated genes, including nucleotide-binding leucine-rich
repeat (NB-LRRs), zinc finger and serine/threonine-protein
kinase genes (Roach //et al.//, 2016). Allelic diversity at the //FaRXf1// locus is unknown.+Accessions US4808 and US4809 were identified as resistant to the four genetic clades of //X. fragariae// (Maas //et al.//, 2002; Hartung //et al.//, 2003). Introgression of the trait into commercial quality perennial-type germplasm was initiated by Roach //et al.// (2016). Resistance detected in two wild accessions US4808 and US4809 was found to be highly heritable and controlled by a major locus //FaRXf1// on linkage group 6D (Roach //et al.//, 2016). Annotation of the //FaRXf1// region in //F. vesca// genome revealed the presence of several resistance-associated genes, including nucleotide-binding leucine-rich
repeat (NB-LRRs), zinc finger and serine/threonine-protein
kinase genes (Roach //et al.//, 2016). Allelic diversity at the //FaRXf1// locus is unknown. Later, the //RXf1// region was further narrowed and structural variations within this locus were identified, which pointed to //FaRGA3// as a promising candidate gene (Kim //et al.//, 2025).
  
 ---- ----
Line 38: Line 33:
  
 //NA// //NA//
- 
 === Source === === Source ===
  
 //NA// //NA//
- 
 === Status (identified, mapped, cloned, sequenced) === === Status (identified, mapped, cloned, sequenced) ===
  
 //NA// //NA//
- 
 === Molecular markers === === Molecular markers ===
  
 //NA// //NA//
- 
 === Brief description === === Brief description ===
  
Line 60: Line 51:
  
 Hartung JS, Gouin CC, Lewers KS, Maas JL, Hokanson S (2003). Identification of sources of resistance to bacterial angular leafspot disease of strawberry. Acta Hort. 626: 155-159. DOI: [[https://doi.org/10.17660/ActaHortic.2003.626.20|10.17660/ActaHortic.2003.626.20]] Hartung JS, Gouin CC, Lewers KS, Maas JL, Hokanson S (2003). Identification of sources of resistance to bacterial angular leafspot disease of strawberry. Acta Hort. 626: 155-159. DOI: [[https://doi.org/10.17660/ActaHortic.2003.626.20|10.17660/ActaHortic.2003.626.20]]
 +
 +Kim JH, Whitaker VM, Lee S (2025). A haplotype-phased genome characterizes the genomic architecture and causal variants for //RXf1// conferring resistance to //Xanthomonas// //fragariae// in strawberry (//F//. × //ananassa//). BMC Genomics 26: 453. DOI: [[https://doi.org/10.1186/s12864-025-11517-w|10.1186/s12864-025-11517-w]]
  
 Maas JL, Gouin CC, Hokanson SC, Hartung JS (2002). Strawberry parent clones US 4808 and US 4809 resistant to bacterial angular leafspot disease caused by //Xanthomonas fragariae//. HortScience 37: 716-717. DOI: [[https://doi.org/10.21273/HORTSCI.37.4.716|10.21273/HORTSCI.37.4.716]] Maas JL, Gouin CC, Hokanson SC, Hartung JS (2002). Strawberry parent clones US 4808 and US 4809 resistant to bacterial angular leafspot disease caused by //Xanthomonas fragariae//. HortScience 37: 716-717. DOI: [[https://doi.org/10.21273/HORTSCI.37.4.716|10.21273/HORTSCI.37.4.716]]
  
 Roach JA, Verma S, Peres NA, Jamieson AR, van de Weg WE, Bink MCAM, Bassil NV, Lee S, Whitaker VM (2016). //FaRXf1//: a locus conferring resistance to angular leaf spot caused by //Xanthomonas fragariae// in octoploid strawberry. Theor. Appl. Genet. 129: 1191-1201. DOI: [[https://doi.org/10.1007/s00122-016-2695-1|10.1007/s00122-016-2695-1]] Roach JA, Verma S, Peres NA, Jamieson AR, van de Weg WE, Bink MCAM, Bassil NV, Lee S, Whitaker VM (2016). //FaRXf1//: a locus conferring resistance to angular leaf spot caused by //Xanthomonas fragariae// in octoploid strawberry. Theor. Appl. Genet. 129: 1191-1201. DOI: [[https://doi.org/10.1007/s00122-016-2695-1|10.1007/s00122-016-2695-1]]
 +
 +----
 +
 +===== Acknowledgements =====
 +
 +This fact sheet is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology).
 +
plant/strawberry.1592229867.txt.gz · Last modified: 2023/01/09 10:20 (external edit)

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