EuroXanth DokuWiki

User Tools

Site Tools

Trace: • effectors • resistance_reviews • software
plant:ryegrass

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
Next revision		Previous revision
plant:ryegrass [2024/03/15 09:18] – koroplant:ryegrass [2025/02/03 22:35] (current) – jfpothier
Line 1: Line 1:
-====== Italian ryegrass (//Lolium multiflorum// L.) ======+====== Plant Resistance Genes in Italian ryegrass (//Lolium multiflorum// L.) against //Xanthomonas// Infection ======
  
 Author: [[https://www.researchgate.net/profile/Florian_Goettelmann|Florian Goettelmann]]\\ Author: [[https://www.researchgate.net/profile/Florian_Goettelmann|Florian Goettelmann]]\\
 Internal reviewer: [[https://www.researchgate.net/profile/Jaroslav_Michalko|Jaroslav Michalko]]\\ Internal reviewer: [[https://www.researchgate.net/profile/Jaroslav_Michalko|Jaroslav Michalko]]\\
-Expert reviewer: **WANTED!**+Expert reviewer: [[https://www.researchgate.net/profile/Roland_Koelliker|Roland Kölliker]] 
 ===== Pathogen: //Xanthomonas transluscens// pv. //graminis// (//Xtg//) ===== ===== Pathogen: //Xanthomonas transluscens// pv. //graminis// (//Xtg//) =====
  
Line 392: Line 393:
 === Brief description === === Brief description ===
  
-BAK1-interacting receptor-like kinase 1 (Knorst //et al.//, 2019) +BAK1-interacting receptor-like kinase 1 (Knorst //et al.//, 2019).
- <font 11.666666030883789px/inherit;;inherit;;inherit>.</font>+
  
 ---- ----
  
-==== Candidate gene: Pik-2-like disease resistance protein gene (evm.TU.chr4.21718) ====+==== Candidate gene: Pik-2-like disease resistance protein (evm.TU.chr4.21718) ====
  
 === Synonyms === === Synonyms ===
  
 Pik2-like Pik2-like
 +
 +=== Source ===
 +
 +F2 mapping population derived from XtgArt03 (Studer et al. 2006).
 +
 +=== Status (identified, mapped, cloned, sequenced) ===
 +
 +Identified and sequenced on LG 4
 +
 +=== Molecular markers ===
 +
 +SNP markers / gene sequence
 +
 +=== Brief description ===
 +
 +High-resolution bulked segregant analysis identified a ~300kb region associated with bacterial wilt resistance in Italian ryegrass (Goettelmann et al. 2024)
 +
 +----
 +
 +==== Candidate gene: Cystein-rich kinase 6 (evm.TU.chr4.21727) ====
 +
 +=== Synonyms ===
 +
 +CRK 6
 +
 +=== Source ===
 +
 +F2 mapping population derived from XtgArt03 (Studer et al. 2006).
 +
 +=== Status (identified, mapped, cloned, sequenced) ===
 +
 +Identified and sequenced on LG 4
 +
 +=== Molecular markers ===
 +
 +SNP markers / gene sequence
 +
 +=== Brief description ===
 +
 +High-resolution bulked segregant analysis identified a ~300kb region associated with bacterial wilt resistance in Italian ryegrass (Goettelmann et al. 2024)
 +
 +----
 +
 +==== Candidate gene: Cystein-rich kinase 8 (evm.TU.chr4.21737/8) ====
 +
 +=== Synonyms ===
 +
 +CRK 8
 +
 +=== Source ===
 +
 +F2 mapping population derived from XtgArt03 (Studer et al. 2006).
 +
 +=== Status (identified, mapped, cloned, sequenced) ===
 +
 +Identified and sequenced on LG 4
 +
 +=== Molecular markers ===
 +
 +SNP markers / gene sequence
 +
 +=== Brief description ===
 +
 +High-resolution bulked segregant analysis identified a ~300kb region associated with bacterial wilt resistance in Italian ryegrass (Goettelmann et al. 2024)
 +
 +----
 +
 +==== Candidate gene: Serine protease inhibitor (evm.TU.chr4.21747-50) ====
 +
 +=== Synonyms ===
 +
 +SERPIN
 +
 +=== Source ===
 +
 +F2 mapping population derived from XtgArt03 (Studer et al. 2006).
 +
 +=== Status (identified, mapped, cloned, sequenced) ===
 +
 +Identified and sequenced on LG 4
 +
 +=== Molecular markers ===
 +
 +SNP markers / gene sequence
 +
 +=== Brief description ===
 +
 +High-resolution bulked segregant analysis identified a ~300kb region associated with bacterial wilt resistance in Italian ryegrass (Goettelmann et al. 2024)
 +
 +----
 +
 +==== Candidate gene: Resistance gene analog 4-like disease resistance protein (evm.TU.chr4.21754) ====
 +
 +=== Synonyms ===
 +
 +RGA5-like
 +
 +=== Source ===
 +
 +F2 mapping population derived from XtgArt03 (Studer et al. 2006).
 +
 +=== Status (identified, mapped, cloned, sequenced) ===
 +
 +Identified and sequenced on LG 4
 +
 +=== Molecular markers ===
 +
 +SNP markers / gene sequence
 +
 +=== Brief description ===
 +
 +High-resolution bulked segregant analysis identified a ~300kb region associated with bacterial wilt resistance in Italian ryegrass (Goettelmann et al. 2024)
 +
 +----
 +
 +==== Candidate gene: Resistance gene analog 5-like disease resistance protein (XLOC_055978/76) ====
 +
 +=== Synonyms ===
 +
 +RGA5-like
  
 === Source === === Source ===
Line 423: Line 543:
 ===== References ===== ===== References =====
  
-Goettelmann F, Yutang C, Knorst V, Yates S, Copetti D, Studer B, Kölliker R (2024). High resolution bulked segregant analysis enables candidate gene identification for bacterial wilt resistance in Italian ryegrass (//Lolium multiflorum// Lam.). The Plant Journal 16693. DOI: [[https://doi.org/10.1111/tpj.16693|https://doi.org/10.1111/tpj.16693]]+Goettelmann F, Yutang C, Knorst V, Yates S, Copetti D, Studer B, Kölliker R (2024). High resolution bulked segregant analysis enables candidate gene identification for bacterial wilt resistance in Italian ryegrass (//Lolium multiflorum// Lam.). Plant J. 118: 1516-1527. DOI: [[https://doi.org/10.1111/tpj.16693|10.1111/tpj.16693]]
  
 Knorst V, Byrne S, Yates S, Asp T, Widmer F, Studer B, Kölliker R (2019). Pooled DNA sequencing to identify SNPs associated with a major QTL for bacterial wilt resistance in Italian ryegrass (//Lolium multiflorum// Lam.). Theor. Appl. Genet. 132: 947-958. DOI: [[https://doi.org/10.1007/s00122-018-3250-z|10.1007/s00122-018-3250-z]] Knorst V, Byrne S, Yates S, Asp T, Widmer F, Studer B, Kölliker R (2019). Pooled DNA sequencing to identify SNPs associated with a major QTL for bacterial wilt resistance in Italian ryegrass (//Lolium multiflorum// Lam.). Theor. Appl. Genet. 132: 947-958. DOI: [[https://doi.org/10.1007/s00122-018-3250-z|10.1007/s00122-018-3250-z]]
Line 438: Line 558:
  
 Sapkota S, Mergoum M, Liu Z (2020). The translucens group of //Xanthomonas translucens//: complicated and important pathogens causing bacterial leaf streak on cereals. Mol. Plant Pathol. 21: 291‐302. DOI: [[https://doi.org/10.1111/mpp.12909|doi:10.1111/mpp.12909]] Sapkota S, Mergoum M, Liu Z (2020). The translucens group of //Xanthomonas translucens//: complicated and important pathogens causing bacterial leaf streak on cereals. Mol. Plant Pathol. 21: 291‐302. DOI: [[https://doi.org/10.1111/mpp.12909|doi:10.1111/mpp.12909]]
 +
 +----
 +
 +===== Acknowledgements =====
 +
 +This fact sheet is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology).
  
plant/ryegrass.1710494325.txt.gz · Last modified: 2024/03/15 09:18 by koro

Page Tools

Except where otherwise noted, content on this wiki is licensed under the following license: CC Attribution-Share Alike 4.0 International
CC Attribution-Share Alike 4.0 International Donate Powered by PHP Valid HTML5 Valid CSS Driven by DokuWiki