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plant:ryegrass

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plant:ryegrass [2023/10/02 15:49] – [Italian ryegrass (//Lolium multiflorum// L.)] rkoebnikplant:ryegrass [2025/02/03 22:35] (current) – jfpothier
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-====== Italian ryegrass (//Lolium multiflorum// L.) ======+====== Plant Resistance Genes in Italian ryegrass (//Lolium multiflorum// L.) against //Xanthomonas// Infection ======
  
 Author: [[https://www.researchgate.net/profile/Florian_Goettelmann|Florian Goettelmann]]\\ Author: [[https://www.researchgate.net/profile/Florian_Goettelmann|Florian Goettelmann]]\\
 Internal reviewer: [[https://www.researchgate.net/profile/Jaroslav_Michalko|Jaroslav Michalko]]\\ Internal reviewer: [[https://www.researchgate.net/profile/Jaroslav_Michalko|Jaroslav Michalko]]\\
-Expert reviewer: **WANTED!**+Expert reviewer: [[https://www.researchgate.net/profile/Roland_Koelliker|Roland Kölliker]]
  
 ===== Pathogen: //Xanthomonas transluscens// pv. //graminis// (//Xtg//) ===== ===== Pathogen: //Xanthomonas transluscens// pv. //graminis// (//Xtg//) =====
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 === Brief description === === Brief description ===
  
-BAK1-interacting receptor-like kinase 1 (Knorst //et al.//, 2019) +BAK1-interacting receptor-like kinase 1 (Knorst //et al.//, 2019). 
- <font 11.666666030883789px/inherit;;inherit;;inherit>.</font>+ 
 +---- 
 + 
 +==== Candidate gene: Pik-2-like disease resistance protein (evm.TU.chr4.21718) ==== 
 + 
 +=== Synonyms === 
 + 
 +Pik2-like 
 + 
 +=== Source === 
 + 
 +F2 mapping population derived from XtgArt03 (Studer et al. 2006). 
 + 
 +=== Status (identified, mapped, cloned, sequenced) === 
 + 
 +Identified and sequenced on LG 4 
 + 
 +=== Molecular markers === 
 + 
 +SNP markers / gene sequence 
 + 
 +=== Brief description === 
 + 
 +High-resolution bulked segregant analysis identified a ~300kb region associated with bacterial wilt resistance in Italian ryegrass (Goettelmann et al. 2024) 
 + 
 +---- 
 + 
 +==== Candidate gene: Cystein-rich kinase 6 (evm.TU.chr4.21727) ==== 
 + 
 +=== Synonyms === 
 + 
 +CRK 6 
 + 
 +=== Source === 
 + 
 +F2 mapping population derived from XtgArt03 (Studer et al. 2006). 
 + 
 +=== Status (identified, mapped, cloned, sequenced) === 
 + 
 +Identified and sequenced on LG 4 
 + 
 +=== Molecular markers === 
 + 
 +SNP markers / gene sequence 
 + 
 +=== Brief description === 
 + 
 +High-resolution bulked segregant analysis identified a ~300kb region associated with bacterial wilt resistance in Italian ryegrass (Goettelmann et al. 2024) 
 + 
 +---- 
 + 
 +==== Candidate gene: Cystein-rich kinase 8 (evm.TU.chr4.21737/8) ==== 
 + 
 +=== Synonyms === 
 + 
 +CRK 8 
 + 
 +=== Source === 
 + 
 +F2 mapping population derived from XtgArt03 (Studer et al. 2006). 
 + 
 +=== Status (identified, mapped, cloned, sequenced) === 
 + 
 +Identified and sequenced on LG 4 
 + 
 +=== Molecular markers === 
 + 
 +SNP markers / gene sequence 
 + 
 +=== Brief description === 
 + 
 +High-resolution bulked segregant analysis identified a ~300kb region associated with bacterial wilt resistance in Italian ryegrass (Goettelmann et al. 2024) 
 + 
 +---- 
 + 
 +==== Candidate gene: Serine protease inhibitor (evm.TU.chr4.21747-50) ==== 
 + 
 +=== Synonyms === 
 + 
 +SERPIN 
 + 
 +=== Source === 
 + 
 +F2 mapping population derived from XtgArt03 (Studer et al. 2006). 
 + 
 +=== Status (identified, mapped, cloned, sequenced) === 
 + 
 +Identified and sequenced on LG 4 
 + 
 +=== Molecular markers === 
 + 
 +SNP markers / gene sequence 
 + 
 +=== Brief description === 
 + 
 +High-resolution bulked segregant analysis identified a ~300kb region associated with bacterial wilt resistance in Italian ryegrass (Goettelmann et al. 2024) 
 + 
 +---- 
 + 
 +==== Candidate gene: Resistance gene analog 4-like disease resistance protein (evm.TU.chr4.21754) ==== 
 + 
 +=== Synonyms === 
 + 
 +RGA5-like 
 + 
 +=== Source === 
 + 
 +F2 mapping population derived from XtgArt03 (Studer et al. 2006). 
 + 
 +=== Status (identified, mapped, cloned, sequenced) === 
 + 
 +Identified and sequenced on LG 4 
 + 
 +=== Molecular markers === 
 + 
 +SNP markers / gene sequence 
 + 
 +=== Brief description === 
 + 
 +High-resolution bulked segregant analysis identified a ~300kb region associated with bacterial wilt resistance in Italian ryegrass (Goettelmann et al. 2024) 
 + 
 +---- 
 + 
 +==== Candidate gene: Resistance gene analog 5-like disease resistance protein (XLOC_055978/76) ==== 
 + 
 +=== Synonyms === 
 + 
 +RGA5-like 
 + 
 +=== Source === 
 + 
 +F2 mapping population derived from XtgArt03 (Studer et al. 2006). 
 + 
 +=== Status (identified, mapped, cloned, sequenced) === 
 + 
 +Identified and sequenced on LG 4 
 + 
 +=== Molecular markers === 
 + 
 +SNP markers / gene sequence 
 + 
 +=== Brief description === 
 + 
 +High-resolution bulked segregant analysis identified a ~300kb region associated with bacterial wilt resistance in Italian ryegrass (Goettelmann et al. 2024)
  
 ---- ----
  
 ===== References ===== ===== References =====
 +
 +Goettelmann F, Yutang C, Knorst V, Yates S, Copetti D, Studer B, Kölliker R (2024). High resolution bulked segregant analysis enables candidate gene identification for bacterial wilt resistance in Italian ryegrass (//Lolium multiflorum// Lam.). Plant J. 118: 1516-1527. DOI: [[https://doi.org/10.1111/tpj.16693|10.1111/tpj.16693]]
  
 Knorst V, Byrne S, Yates S, Asp T, Widmer F, Studer B, Kölliker R (2019). Pooled DNA sequencing to identify SNPs associated with a major QTL for bacterial wilt resistance in Italian ryegrass (//Lolium multiflorum// Lam.). Theor. Appl. Genet. 132: 947-958. DOI: [[https://doi.org/10.1007/s00122-018-3250-z|10.1007/s00122-018-3250-z]] Knorst V, Byrne S, Yates S, Asp T, Widmer F, Studer B, Kölliker R (2019). Pooled DNA sequencing to identify SNPs associated with a major QTL for bacterial wilt resistance in Italian ryegrass (//Lolium multiflorum// Lam.). Theor. Appl. Genet. 132: 947-958. DOI: [[https://doi.org/10.1007/s00122-018-3250-z|10.1007/s00122-018-3250-z]]
Line 413: Line 558:
  
 Sapkota S, Mergoum M, Liu Z (2020). The translucens group of //Xanthomonas translucens//: complicated and important pathogens causing bacterial leaf streak on cereals. Mol. Plant Pathol. 21: 291‐302. DOI: [[https://doi.org/10.1111/mpp.12909|doi:10.1111/mpp.12909]] Sapkota S, Mergoum M, Liu Z (2020). The translucens group of //Xanthomonas translucens//: complicated and important pathogens causing bacterial leaf streak on cereals. Mol. Plant Pathol. 21: 291‐302. DOI: [[https://doi.org/10.1111/mpp.12909|doi:10.1111/mpp.12909]]
 +
 +----
 +
 +===== Acknowledgements =====
 +
 +This fact sheet is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology).
  
plant/ryegrass.1696258166.txt.gz · Last modified: 2023/10/02 15:49 by rkoebnik

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