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plant:rice [2025/10/27 17:06] – [Further reading] rkoebnikplant:rice [2026/04/20 12:56] (current) – [References] rkoebnik
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 === Brief description === === Brief description ===
  
-NB-LRR class protein (Yoshimura //et al//., 1998). Cognate avirulence genes: TAL effector genes. Neutralized by interfering TAL effectors, so-called iTALEs or truncTALEs (Ji //et al//., 2016; Read //et al//., 2016).+NB-LRR class protein (Yoshimura //et al//., 1998). Cognate avirulence genes: TAL effector genes. Neutralized by interfering TAL effectors, so-called iTALEs or truncTALEs (Ji //et al//., 2016; Read //et al//., 2016). A novel variant of the //Xa1// gene (Os04g53120) from the rice variety SK20-28 (derived from a cross between Giganté and Kogoni 91-1) is characterized by a short deletion in the effector-binding element (EBE) of TAL effector, an extended leucine-rich repeat (LRR) domain and enhanced recognition specifcity toward local //Xanthomonas oryzae// pathotypes in Mali (Tekete //et al.//, 2026).
 === Other resources === === Other resources ===
  
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 === Source === === Source ===
  
-//Indica// rice accession RP9-3 from the Philippines. Also on  IR8 and IR944 lines (Ogawa //et al.//, 1991).+//Indica// rice accession RP9-3 from the Philippines. Also on IR8 and IR944 lines (Ogawa //et al.//, 1991).
 === Status (identified, mapped, cloned, sequenced) === === Status (identified, mapped, cloned, sequenced) ===
  
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 The immune receptor XA21 is cleaved by the rhomboid-like protease OsRBL3b, likely within its transmembrane domain, which protects grain set and male fertility in rice. This balance between reproduction and disease resistance through the specific expression of a rhomboid protease may be key to limiting the detrimental effects of an active immune response (Vergish et al., 2025). The immune receptor XA21 is cleaved by the rhomboid-like protease OsRBL3b, likely within its transmembrane domain, which protects grain set and male fertility in rice. This balance between reproduction and disease resistance through the specific expression of a rhomboid protease may be key to limiting the detrimental effects of an active immune response (Vergish et al., 2025).
  
 +The small secreted peptide OsRALF26, previously identified as an //Oryza//-specific ligand for FERONIA-like receptor 1 (OsFLR1), is also directly perceived by XA21. OsRALF26 as a host-derived ligand of XA21 is required for full activation of XA21-mediated immunity in distal tissues, consistent with a role for OsRALF26 in spatial propagation of XA21-dependent defence (Kwon //et al.//, 2026).
 === Other resources === === Other resources ===
  
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 [[https://funricegenes.github.io/LOC_Os11g46200/|FunRiceGenes]]. [[https://funricegenes.github.io/LOC_Os11g46200/|FunRiceGenes]].
 +
 +----
 +
 +==== Resistance gene: //Xa48// ====
 +
 +=== Synonyms ===
 +
 +//LOC_Os03g48370//
 +=== Source ===
 +
 +//Oryza sativa indica// Shuangkeza (Lin //et al.//, 2026).
 +=== Status (identified, mapped, cloned, sequenced) ===
 +
 +Identified and mapped on chromosome 3 (Lin //et al.//, 2026). Cloned and sequenced (Lin //et al.//, 2026).
 +=== Molecular markers ===
 +
 +InDel markers (Lin //et al.//, 2026).
 +=== Brief description ===
 +
 +Member of the nucleotide-binding site and leucine-rich repeat (NLR) receptor family. XA48 perceives the ancient pathogen effector XopG, activating effector-triggered immunity by degrading the negative regulator OsVOZ1/2 (Lin //et al.//, 2026).
  
 ---- ----
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 Bao S, Tan M, Lin X (2010). Genetic mapping of a bacterial blight resistance gene //Xa14// in rice. Acta Agronomica Sin. 36: 422-427. Bao S, Tan M, Lin X (2010). Genetic mapping of a bacterial blight resistance gene //Xa14// in rice. Acta Agronomica Sin. 36: 422-427.
  
-Bhatia SK, Vikal Y, Kaur P, Dhillon GS, Kaur G, Neelam K, Malik P, Lore JS, Khanna R, Singh K (2025). Introgression and mapping of a novel bacterial blight resistance gene //xa49(t)// from //Oryza rufipogon// acc. CR100098A into //O. sativa//. Phytopathology +Bhatia SK, Vikal Y, Kaur P, Dhillon GS, Kaur G, Neelam K, Malik P, Lore JS, Khanna R, Singh K (2025). Introgression and mapping of a novel bacterial blight resistance gene //xa49(t)// from //Oryza rufipogon// acc. CR100098A into //O. sativa//. Phytopathology 114: 2412-2420. DOI: [[https://doi.org/10.1094/PHYTO-02-24-0061-R|10.1094/PHYTO-02-24-0061-R]]
- <font 11.0pt/inherit;;inherit;;inherit>114: 2412-2420</font>  . DOI: [[https://doi.org/10.1094/PHYTO-02-24-0061-R|10.1094/PHYTO-02-24-0061-R]]+
  
 Busungu C, Taura S, Sakagami JI, Anai T, Ichitani K (2018). High-resolution mapping and characterization of //xa42//, a resistance gene against multiple //Xanthomonas oryzae// pv. //oryzae// races in rice (//Oryza sativa// L.). Breed. Sci. 68: 188-199. DOI: [[https://doi.org/10.1270/jsbbs.17094|10.1270/jsbbs.17094]] Busungu C, Taura S, Sakagami JI, Anai T, Ichitani K (2018). High-resolution mapping and characterization of //xa42//, a resistance gene against multiple //Xanthomonas oryzae// pv. //oryzae// races in rice (//Oryza sativa// L.). Breed. Sci. 68: 188-199. DOI: [[https://doi.org/10.1270/jsbbs.17094|10.1270/jsbbs.17094]]
Line 1312: Line 1332:
  
 Kurata N, Yamazaki Y (2006). Oryzabase. An integrated biological and genome information database for rice. Plant Physiol. 140: 12-17. DOI: [[https://doi.org/10.1104/pp.105.063008|10.1104/pp.105.063008]] Kurata N, Yamazaki Y (2006). Oryzabase. An integrated biological and genome information database for rice. Plant Physiol. 140: 12-17. DOI: [[https://doi.org/10.1104/pp.105.063008|10.1104/pp.105.063008]]
 +
 +Kwon OK, Jeong AR, Park CJ (2026). OsRALF26 serves as an endogenous signal recognised by XA21 to promote robust and distal resistance in rice. Plant Biotechnol. J., in press. DOI: [[https://doi.org/10.1111/pbi.70622|10.1111/pbi.70622]]
  
 Lee KS, Khush GS (2000). Genetic analysis of resistance to bacterial blight, //Xanthomonas oryzae// pv. //oryzae// rice. Rice Genet. Newsl. 17: 72. Full text @ [[https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol17/d28.html|Oryzabase]] and @ [[https://archive.gramene.org/newsletters/rice_genetics/rgn17/d28.html|Gramene]] Lee KS, Khush GS (2000). Genetic analysis of resistance to bacterial blight, //Xanthomonas oryzae// pv. //oryzae// rice. Rice Genet. Newsl. 17: 72. Full text @ [[https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol17/d28.html|Oryzabase]] and @ [[https://archive.gramene.org/newsletters/rice_genetics/rgn17/d28.html|Gramene]]
Line 1323: Line 1345:
 Liang LQ, Wang CY, Zeng LX, Wang WJ, Feng JQ, Chen B, Su J, Chen S, Shang FD, Zhu XY, Lin F (2017). The rice cultivar Baixiangzhan harbours a recessive gene //xa42// (//t//) determining resistance against //Xanthomonas oryzae// pv. //oryzae//. Plant Breed. 136: 603-609. DOI: [[https://doi.org/10.1111/pbr.12493|10.1111/pbr.12493]] Liang LQ, Wang CY, Zeng LX, Wang WJ, Feng JQ, Chen B, Su J, Chen S, Shang FD, Zhu XY, Lin F (2017). The rice cultivar Baixiangzhan harbours a recessive gene //xa42// (//t//) determining resistance against //Xanthomonas oryzae// pv. //oryzae//. Plant Breed. 136: 603-609. DOI: [[https://doi.org/10.1111/pbr.12493|10.1111/pbr.12493]]
  
-Lin XH, Zhang DP,Xie YF, Gao HP, Zhang Q (1996). Identifying and mapping a new gene for bacterial blight resistance in rice based on RFLP markers. Phytopathology 86: 1156-1159. Full text @ [[https://www.apsnet.org/publications/phytopathology/backissues/Documents/1996Abstracts/Phyto_86_1156.htm|APS]]+Lin H, Chen F, Cheng G, Yan B, Yuan M, Qiu J, Lu Y, Suo M, Chen Y, Wang Y, Cui K, Gong X, Liu S, Liu B, Liu J, Wang J, Li R, Mao B, Xu J, Jeon JS, Huang X, Han B, Yang DL, Gao Q, Xu H, Deng Y, Chen G, He Z (2026). Asymmetric selection of a rice immune module and rebuild of disease resistance. Nature, in press. DOI: [[https://doi.org/10.1038/s41586-026-10361-6|10.1038/s41586-026-10361-6]] 
 + 
 +Lin XH, Zhang DP, Xie YF, Gao HP, Zhang Q (1996). Identifying and mapping a new gene for bacterial blight resistance in rice based on RFLP markers. Phytopathology 86: 1156-1159. Full text @ [[https://www.apsnet.org/publications/phytopathology/backissues/Documents/1996Abstracts/Phyto_86_1156.htm|APS]]
  
 Liu HX, Liu FQ, Hu BS, Yang WF, Chen ZY, Xu ZG (2004). Virulence of //Xanthomonas oryzae// pv. //oryzae// on rice near-isogenic lines with single resistance gene and pyramiding lines in China. Agric. Sci. China 3: 764-769. Liu HX, Liu FQ, Hu BS, Yang WF, Chen ZY, Xu ZG (2004). Virulence of //Xanthomonas oryzae// pv. //oryzae// on rice near-isogenic lines with single resistance gene and pyramiding lines in China. Agric. Sci. China 3: 764-769.
Line 1402: Line 1426:
  
 Taura S, Ogawa T, Yoshimura A, Ikeda R, Iwata N (1992). Identification of a recessive resistance gene to rice bacterial blight of mutant line XM6, //Oryza sativa// L. Japan. J. Breed. 42: 7-13. DOI: [[https://doi.org/10.1270/jsbbs1951.42.7|10.1270/jsbbs1951.42.7]] Taura S, Ogawa T, Yoshimura A, Ikeda R, Iwata N (1992). Identification of a recessive resistance gene to rice bacterial blight of mutant line XM6, //Oryza sativa// L. Japan. J. Breed. 42: 7-13. DOI: [[https://doi.org/10.1270/jsbbs1951.42.7|10.1270/jsbbs1951.42.7]]
 +
 +Tekete C, Dembélé AB, Doucouré H, Konaté L, Keïta I, Kanté M, Sarra S, Szurek B, Le Bars M, Koïta O (2026). Field validation of a novel //Xa1// variant in rice variety SK20-28 for resistance to bacterial diseases in the Banfara Lowlands of Mali. Int. J. Agron. 2026: 2572173. DOI: [[https://doi.org/10.1155/ioa/2572173|10.1155/ioa/2572173]]
  
 Tian D, Wang J, Zeng X, Gu K, Qiu C, Yang X, Zhou Z, Goh M, Luo Y, Murata-Hori M, White FF, Yin Z (2014). The rice TAL effector-dependent resistance protein XA10 triggers cell death and calcium depletion in the endoplasmic reticulum. Plant Cell 26: 497-515. DOI: [[https://doi.org/10.1105/tpc.113.119255|10.1105/tpc.113.119255]] Tian D, Wang J, Zeng X, Gu K, Qiu C, Yang X, Zhou Z, Goh M, Luo Y, Murata-Hori M, White FF, Yin Z (2014). The rice TAL effector-dependent resistance protein XA10 triggers cell death and calcium depletion in the endoplasmic reticulum. Plant Cell 26: 497-515. DOI: [[https://doi.org/10.1105/tpc.113.119255|10.1105/tpc.113.119255]]
plant/rice.1761584809.txt.gz · Last modified: 2025/10/27 17:06 by rkoebnik

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