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plant:rice [2025/10/01 08:29] – [Resistance gene: //Xa14//] rkoebnikplant:rice [2025/11/15 15:41] (current) – jfpothier
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 ====== Plant Resistance Genes in Rice (//Oryza// spp.) against //Xanthomonas// Infection ====== ====== Plant Resistance Genes in Rice (//Oryza// spp.) against //Xanthomonas// Infection ======
  
-Author: [[https://www.researchgate.net/profile/Ralf_Koebnik|Ralf Koebnik]]+Author: [[https://www.researchgate.net/profile/Ralf_Koebnik|Ralf Koebnik]]\\
  
 **Additional information on rice resistance genes can be found at the [[https://shigen.nig.ac.jp/rice/oryzabase/|Oryzabase]] database (Kurata & Yamazaki, 2006).** **Additional information on rice resistance genes can be found at the [[https://shigen.nig.ac.jp/rice/oryzabase/|Oryzabase]] database (Kurata & Yamazaki, 2006).**
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 === Source === === Source ===
  
-//Indica// rice accession RP9-3 from the Philippines. Also on  IR8 and IR944 lines (Ogawa //et al.//, 1991).+//Indica// rice accession RP9-3 from the Philippines. Also on IR8 and IR944 lines (Ogawa //et al.//, 1991).
 === Status (identified, mapped, cloned, sequenced) === === Status (identified, mapped, cloned, sequenced) ===
  
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 === Status (identified, mapped, cloned, sequenced) === === Status (identified, mapped, cloned, sequenced) ===
  
-Mapped on chromosome 4 (Bao //et al//., 2010). Cloned and sequenced (Ji //et al//., 2020). MSU ID: LOC_Os04g53120+Identified (Taura //et al.//, 1987). Mapped on chromosome 4 (Bao //et al//., 2010). Cloned and sequenced (Ji //et al//., 2020). MSU ID: LOC_Os04g53120
 === Molecular markers === === Molecular markers ===
  
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 === Status (identified, mapped, cloned, sequenced) === === Status (identified, mapped, cloned, sequenced) ===
  
-Mapped on chromosome 4 (Endo //et al//., 2009, 2012).+Identified (Ogawa //et al.//, 1989). Mapped on chromosome 4 (Endo //et al//., 2009, 2012).
 === Molecular markers === === Molecular markers ===
  
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 === Status (identified, mapped, cloned, sequenced) === === Status (identified, mapped, cloned, sequenced) ===
  
-Mapped on chromosome 11 (Ronald //et al//., 1992). Cloned and sequenced (Song //et al//., 1995).+Identified (Khush //et al.//, 1990). Mapped on chromosome 11 (Ronald //et al//., 1992). Cloned and sequenced (Song //et al//., 1995). MSU ID: LOC_Os11g35500
 === Molecular markers === === Molecular markers ===
  
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 Bao S, Tan M, Lin X (2010). Genetic mapping of a bacterial blight resistance gene //Xa14// in rice. Acta Agronomica Sin. 36: 422-427. Bao S, Tan M, Lin X (2010). Genetic mapping of a bacterial blight resistance gene //Xa14// in rice. Acta Agronomica Sin. 36: 422-427.
  
-Bhatia SK, Vikal Y, Kaur P, Dhillon GS, Kaur G, Neelam K, Malik P, Lore JS, Khanna R, Singh K (2025). Introgression and mapping of a novel bacterial blight resistance gene //xa49(t)// from //Oryza rufipogon// acc. CR100098A into //O. sativa//. Phytopathology +Bhatia SK, Vikal Y, Kaur P, Dhillon GS, Kaur G, Neelam K, Malik P, Lore JS, Khanna R, Singh K (2025). Introgression and mapping of a novel bacterial blight resistance gene //xa49(t)// from //Oryza rufipogon// acc. CR100098A into //O. sativa//. Phytopathology 114: 2412-2420. DOI: [[https://doi.org/10.1094/PHYTO-02-24-0061-R|10.1094/PHYTO-02-24-0061-R]]
- <font 11.0pt/inherit;;inherit;;inherit>114: 2412-2420</font>  . DOI: [[https://doi.org/10.1094/PHYTO-02-24-0061-R|10.1094/PHYTO-02-24-0061-R]]+
  
 Busungu C, Taura S, Sakagami JI, Anai T, Ichitani K (2018). High-resolution mapping and characterization of //xa42//, a resistance gene against multiple //Xanthomonas oryzae// pv. //oryzae// races in rice (//Oryza sativa// L.). Breed. Sci. 68: 188-199. DOI: [[https://doi.org/10.1270/jsbbs.17094|10.1270/jsbbs.17094]] Busungu C, Taura S, Sakagami JI, Anai T, Ichitani K (2018). High-resolution mapping and characterization of //xa42//, a resistance gene against multiple //Xanthomonas oryzae// pv. //oryzae// races in rice (//Oryza sativa// L.). Breed. Sci. 68: 188-199. DOI: [[https://doi.org/10.1270/jsbbs.17094|10.1270/jsbbs.17094]]
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 Ji C, Ji Z, Liu B, Cheng H, Liu H, Liu S, Yang B, Chen G (2020). //Xa1// allelic //R// genes activate rice blight resistance suppressed by interfering TAL effectors. Plant Comm. 1: 100087. DOI: [[https://doi.org/10.1016/j.xplc.2020.100087|10.1016/j.xplc.2020.100087]] Ji C, Ji Z, Liu B, Cheng H, Liu H, Liu S, Yang B, Chen G (2020). //Xa1// allelic //R// genes activate rice blight resistance suppressed by interfering TAL effectors. Plant Comm. 1: 100087. DOI: [[https://doi.org/10.1016/j.xplc.2020.100087|10.1016/j.xplc.2020.100087]]
  
-Jiang GH, Xia ZH, Zhou YL, Wan J, Li DY, Chen RS (2006). Testifying the rice bacterial blight resistance gene //xa5// by genetic complementation and further analyzing //xa5// (//Xa5//) in comparison with its homolog TFIIAgamma1. Mol. Genet. Genomics 275: 354-366. DOI: [[https://doi.org/978-3-319- 45021-6_20/s00438-005-0091-7|978-3-319- 45021-6_20/s00438-005-0091-7]]+Jiang GH, Xia ZH, Zhou YL, Wan J, Li DY, Chen RS (2006). Testifying the rice bacterial blight resistance gene //xa5// by genetic complementation and further analyzing //xa5// (//Xa5//) in comparison with its homolog TFIIAgamma1. Mol. Genet. Genomics 275: 354-366. DOI: [[https://doi.org/10.1007/s00438-005-0091-7|10.1007/s00438-005-0091-7]]
  
 Kaku H, Ogawa T (2001). Genetic Analysis of the relationship between the browning reaction and bacterial blight resistance gene //Xa3// in rice. J. Gen. Plant Pathol. 67: 228-230. DOI: [[https://doi.org/10.1007/PL00013017|10.1007/PL00013017]] Kaku H, Ogawa T (2001). Genetic Analysis of the relationship between the browning reaction and bacterial blight resistance gene //Xa3// in rice. J. Gen. Plant Pathol. 67: 228-230. DOI: [[https://doi.org/10.1007/PL00013017|10.1007/PL00013017]]
  
-Kaur R, Grewal N, Das A, Vikal Y, Singh J, Bharaj TS, Sidhu JS, Singh K (2005). Inheritance of bacterial blight resistance in two accessions of wild rice, //Oryza nivara//. Rice Genet. Newsl. 22: 78. Full text @ [[https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol22/v23.html|Oryzagene]]+Kaur R, Grewal N, Das A, Vikal Y, Singh J, Bharaj TS, Sidhu JS, Singh K (2005). Inheritance of bacterial blight resistance in two accessions of wild rice, //Oryza nivara//. Rice Genet. Newsl. 22: 78. Full text @ [[https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol22/v23.html|Oryzabase]]
  
-Khush GS, Angeles ER (1999). A new gene for resistance to race 6 of bacterial blight in rice, //Oryza sativa//. Rice Genet. Newsl. 16: 92-93. Full text @ [[https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol16/v16p92.html|Oryzagene]] and @ [[https://archive.gramene.org/newsletters/rice_genetics/rgn16/v16p92.html|Gramene]]+Khush GS, Angeles ER (1999). A new gene for resistance to race 6 of bacterial blight in rice, //Oryza sativa//. Rice Genet. Newsl. 16: 92-93. Full text @ [[https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol16/v16p92.html|Oryzabase]] and @ [[https://archive.gramene.org/newsletters/rice_genetics/rgn16/v16p92.html|Gramene]] 
 + 
 +Khush GS, Bacalangco E, Ogawa T (1990). A new gene for resistance to bacterial blight from //Oryza longistaminata//. Rice Genet. Newsl. 7: 121-122. Full text @ [[https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol7/v7p122.html|Oryzabase]]
  
 Kim SM, Suh JP, Qin Y, Noh TH, Reinke RF, Jena KK (2015). Identification and fine-mapping of a new resistance gene, //Xa40//, conferring resistance to bacterial blight races in rice (//Oryza sativa// L.). Theor. Appl. Genet.128: 1933-1943. DOI: [[https://doi.org/10.1007/s00122-015-2557-2|10.1007/s00122-015-2557-2]] Kim SM, Suh JP, Qin Y, Noh TH, Reinke RF, Jena KK (2015). Identification and fine-mapping of a new resistance gene, //Xa40//, conferring resistance to bacterial blight races in rice (//Oryza sativa// L.). Theor. Appl. Genet.128: 1933-1943. DOI: [[https://doi.org/10.1007/s00122-015-2557-2|10.1007/s00122-015-2557-2]]
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 Kurata N, Yamazaki Y (2006). Oryzabase. An integrated biological and genome information database for rice. Plant Physiol. 140: 12-17. DOI: [[https://doi.org/10.1104/pp.105.063008|10.1104/pp.105.063008]] Kurata N, Yamazaki Y (2006). Oryzabase. An integrated biological and genome information database for rice. Plant Physiol. 140: 12-17. DOI: [[https://doi.org/10.1104/pp.105.063008|10.1104/pp.105.063008]]
  
-Lee KS, Khush GS (2000). Genetic analysis of resistance to bacterial blight, //Xanthomonas oryzae// pv. //oryzae// rice. Rice Genet. Newsl. 17: 72. Full text @ [[https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol17/d28.html|Oryzagene]] and @ [[https://archive.gramene.org/newsletters/rice_genetics/rgn17/d28.html|Gramene]]+Lee KS, Khush GS (2000). Genetic analysis of resistance to bacterial blight, //Xanthomonas oryzae// pv. //oryzae// rice. Rice Genet. Newsl. 17: 72. Full text @ [[https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol17/d28.html|Oryzabase]] and @ [[https://archive.gramene.org/newsletters/rice_genetics/rgn17/d28.html|Gramene]]
  
 Lee KS, Rasabandith S, Angeles ER, Khush GS (2003). Inheritance of resistance to bacterial blight in 21 cultivars of rice. Phytopathology 93: 147-152. DOI: [[https://doi.org/10.1094/PHYTO.2003.93.2.147|10.1094/PHYTO.2003.93.2.147]] Lee KS, Rasabandith S, Angeles ER, Khush GS (2003). Inheritance of resistance to bacterial blight in 21 cultivars of rice. Phytopathology 93: 147-152. DOI: [[https://doi.org/10.1094/PHYTO.2003.93.2.147|10.1094/PHYTO.2003.93.2.147]]
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 Neelam K, Mahajan R, Gupta V, Bhatia D, Gill BK, Komal R, Lore JS, Mangat GS, Singh K (2020). High-resolution genetic mapping of a novel bacterial blight resistance gene //xa-45 (t)// identified from //Oryza glaberrima// and transferred to //Oryza sativa//. Theor. Appl. Genet. 133: 689-705. DOI: [[https://doi.org/10.1007/s00122-019-03501-2|10.1007/s00122-019-03501-2]] Neelam K, Mahajan R, Gupta V, Bhatia D, Gill BK, Komal R, Lore JS, Mangat GS, Singh K (2020). High-resolution genetic mapping of a novel bacterial blight resistance gene //xa-45 (t)// identified from //Oryza glaberrima// and transferred to //Oryza sativa//. Theor. Appl. Genet. 133: 689-705. DOI: [[https://doi.org/10.1007/s00122-019-03501-2|10.1007/s00122-019-03501-2]]
 +
 +Ogawa T, Kaku H, Yamamoto T (1989). Resistance gene of rice cultivar Asominori to bacterial blight of rice. Jpn. J. Breed. 39: S196-S197.
  
 Ogawa T, Morinaka T, Fujii K, Kimura T (1978). Inheritance of resistance of rice varieties Kogyoku and Java 14 to bacterial group V of //Xanthomonas oryzae//. Jpn. J. Phytopathol. 44: 137-141. Ogawa T, Morinaka T, Fujii K, Kimura T (1978). Inheritance of resistance of rice varieties Kogyoku and Java 14 to bacterial group V of //Xanthomonas oryzae//. Jpn. J. Phytopathol. 44: 137-141.
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 Streubel J, Pesce C, Hutin M, Koebnik R, Boch J, Szurek B (2013). Five phylogenetically close rice //SWEET// genes confer TAL effector-mediated susceptibility to //Xanthomonas oryzae// pv. //oryzae//. New Phytol. 200: 808-819. DOI: [[https://doi.org/10.1111/nph.12411|10.1111/nph.12411]] Streubel J, Pesce C, Hutin M, Koebnik R, Boch J, Szurek B (2013). Five phylogenetically close rice //SWEET// genes confer TAL effector-mediated susceptibility to //Xanthomonas oryzae// pv. //oryzae//. New Phytol. 200: 808-819. DOI: [[https://doi.org/10.1111/nph.12411|10.1111/nph.12411]]
  
-Sugio A, Yang B, Zhu T, White FF (2007). Two type III effector genes of //Xanthomonas oryzae// pv. //oryzae// control the induction of the host genes OsTFIIAgamma1 and OsTFX1 during bacterial blight of rice. Proc Natl. Acad. Sci. U. S. A. 104: 10720-10725. DOI: [[https://doi.org/10.1073/pnas.0701742104|10.1073/pnas.0701742104]]+Sugio A, Yang B, Zhu T, White FF (2007). Two type III effector genes of //Xanthomonas oryzae// pv. //oryzae// control the induction of the host genes //OsTFIIAγ1// and //OsTFX1// during bacterial blight of rice. Proc Natl. Acad. Sci. U. S. A. 104: 10720-10725. DOI: [[https://doi.org/10.1073/pnas.0701742104|10.1073/pnas.0701742104]]
  
 Sun X, Yang Z, Wang S, Zhang Q (2003). Identification of a 47-kb DNA fragment containing //Xa4//, a locus for bacterial blight resistance in rice. Theor. Appl. Genet. 106: 683-687. DOI: [[https://doi.org/10.1007/s00122-002-1117-8|10.1007/s00122-002-1117-8]] Sun X, Yang Z, Wang S, Zhang Q (2003). Identification of a 47-kb DNA fragment containing //Xa4//, a locus for bacterial blight resistance in rice. Theor. Appl. Genet. 106: 683-687. DOI: [[https://doi.org/10.1007/s00122-002-1117-8|10.1007/s00122-002-1117-8]]
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 Taura S, Ichitani K (2023). Chromosomal location of //xa19//, a broad-spectrum rice bacterial blight resistant gene from XM5, a mutant line from IR24. Plants (Basel) 12: 602. DOI: [[https://doi.org/10.3390/plants12030602|10.3390/plants12030602]] Taura S, Ichitani K (2023). Chromosomal location of //xa19//, a broad-spectrum rice bacterial blight resistant gene from XM5, a mutant line from IR24. Plants (Basel) 12: 602. DOI: [[https://doi.org/10.3390/plants12030602|10.3390/plants12030602]]
 +
 +Taura S, Ogawa T, Tabien RE, Khush GS, Yoshimura A, Omura T (1987). The specific reaction of Taichung Native 1 to Philippine races of bacterial blight and inheritance of resistance to race 5 (PXO 112). Rice Genet. Newsl. 4: 101-102. Full text @ [[https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol4/v4p101.html|Oryzabase]]
  
 Taura S, Ogawa T, Yoshimura A, Ikea R, Omura T (1991). Identification of a recessive resistance gene in induced mutant line XM5 of rice to rice bacterial blight. Japan. J. Breed. 41: 427-432. DOI: [[https://doi.org/10.1270/jsbbs1951.41.427|10.1270/jsbbs1951.41.427]] Taura S, Ogawa T, Yoshimura A, Ikea R, Omura T (1991). Identification of a recessive resistance gene in induced mutant line XM5 of rice to rice bacterial blight. Japan. J. Breed. 41: 427-432. DOI: [[https://doi.org/10.1270/jsbbs1951.41.427|10.1270/jsbbs1951.41.427]]
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 Takatsuji H (2014). Development of disease-resistant rice using regulatory components of induced disease resistance. Front. Plant Sci. 5: 630. DOI: [[https://doi.org/10.3389/fpls.2014.00630|10.3389/fpls.2014.00630]] Takatsuji H (2014). Development of disease-resistant rice using regulatory components of induced disease resistance. Front. Plant Sci. 5: 630. DOI: [[https://doi.org/10.3389/fpls.2014.00630|10.3389/fpls.2014.00630]]
 +
 +Tauqeer Z, Tauqeer A, Memon SP, Younas MU, Wang G, Islam W (2025). Unraveling rice defense against bacterial blight: molecular pathways, resistance genes and breeding perspectives. Microb. Pathog. 209: 108128. DOI: [[https://doi.org/10.1016/j.micpath.2025.108128|10.1016/j.micpath.2025.108128]]
  
 Vemanna RS, Bakade R, Bharti P, Kumar MKP, Sreeman SM, Senthil-Kumar M, Makarla U (2019). Cross-talk signaling in rice during combined drought and bacterial blight stress. Front. Plant Sci. 10: 193. DOI: [[https://doi.org/10.3389/fpls.2019.00193|10.3389/fpls.2019.00193]] Vemanna RS, Bakade R, Bharti P, Kumar MKP, Sreeman SM, Senthil-Kumar M, Makarla U (2019). Cross-talk signaling in rice during combined drought and bacterial blight stress. Front. Plant Sci. 10: 193. DOI: [[https://doi.org/10.3389/fpls.2019.00193|10.3389/fpls.2019.00193]]
plant/rice.1759303776.txt.gz · Last modified: 2025/10/01 08:29 by rkoebnik

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