EuroXanth DokuWiki

User Tools

Site Tools

Trace:
plant:rice

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
Next revision		Previous revision
plant:rice [2025/09/30 13:28] – [Resistance gene: //Xa11//] rkoebnikplant:rice [2025/10/02 09:36] (current) – [References] jfpothier
Line 252: Line 252:
 === Synonyms === === Synonyms ===
  
-//NA//+//Xa-kg// (Ogawa //et al.//, 1978).
 === Source === === Source ===
  
Line 258: Line 258:
 === Status (identified, mapped, cloned, sequenced) === === Status (identified, mapped, cloned, sequenced) ===
  
-Mapped on chromosome 4 (Mew, 1987). +Mapped on chromosome 4 (Ogawa //et al.//, 1978).
 === Molecular markers === === Molecular markers ===
  
Line 280: Line 279:
 === Status (identified, mapped, cloned, sequenced) === === Status (identified, mapped, cloned, sequenced) ===
  
-Mapped on chromosome 8 (Chu //et al.//, 2006). Cloned and sequenced (Yang //et al//., 2006; Yuan //et al//., 2009).+Mapped on chromosome 8 (Chu //et al.//, 2006). Cloned and sequenced (Yang //et al//., 2006; Yuan //et al//., 2009). MSU ID: LOC_Os08g42350
 === Molecular markers === === Molecular markers ===
  
Line 300: Line 299:
 === Status (identified, mapped, cloned, sequenced) === === Status (identified, mapped, cloned, sequenced) ===
  
-Mapped on chromosome 4 (Bao //et al//., 2010). Cloned and sequenced (Ji //et al//., 2020).+Identified (Taura //et al.//, 1987). Mapped on chromosome 4 (Bao //et al//., 2010). Cloned and sequenced (Ji //et al//., 2020). MSU ID: LOC_Os04g53120
 === Molecular markers === === Molecular markers ===
  
Line 362: Line 361:
 === Status (identified, mapped, cloned, sequenced) === === Status (identified, mapped, cloned, sequenced) ===
  
-Mapped on chromosome 4 (Endo //et al//., 2009, 2012).+Identified (Ogawa //et al.//, 1989). Mapped on chromosome 4 (Endo //et al//., 2009, 2012).
 === Molecular markers === === Molecular markers ===
  
Line 445: Line 444:
 === Status (identified, mapped, cloned, sequenced) === === Status (identified, mapped, cloned, sequenced) ===
  
-Mapped on chromosome 11 (Ronald //et al//., 1992). Cloned and sequenced (Song //et al//., 1995).+Identified (Khush //et al.//, 1990). Mapped on chromosome 11 (Ronald //et al//., 1992). Cloned and sequenced (Song //et al//., 1995). MSU ID: LOC_Os11g35500
 === Molecular markers === === Molecular markers ===
  
Line 1294: Line 1293:
 Ji C, Ji Z, Liu B, Cheng H, Liu H, Liu S, Yang B, Chen G (2020). //Xa1// allelic //R// genes activate rice blight resistance suppressed by interfering TAL effectors. Plant Comm. 1: 100087. DOI: [[https://doi.org/10.1016/j.xplc.2020.100087|10.1016/j.xplc.2020.100087]] Ji C, Ji Z, Liu B, Cheng H, Liu H, Liu S, Yang B, Chen G (2020). //Xa1// allelic //R// genes activate rice blight resistance suppressed by interfering TAL effectors. Plant Comm. 1: 100087. DOI: [[https://doi.org/10.1016/j.xplc.2020.100087|10.1016/j.xplc.2020.100087]]
  
-Jiang GH, Xia ZH, Zhou YL, Wan J, Li DY, Chen RS (2006). Testifying the rice bacterial blight resistance gene //xa5// by genetic complementation and further analyzing //xa5// (//Xa5//) in comparison with its homolog TFIIAgamma1. Mol. Genet. Genomics 275: 354-366. DOI: [[https://doi.org/978-3-319- 45021-6_20/s00438-005-0091-7|978-3-319- 45021-6_20/s00438-005-0091-7]]+Jiang GH, Xia ZH, Zhou YL, Wan J, Li DY, Chen RS (2006). Testifying the rice bacterial blight resistance gene //xa5// by genetic complementation and further analyzing //xa5// (//Xa5//) in comparison with its homolog TFIIAgamma1. Mol. Genet. Genomics 275: 354-366. DOI: [[https://doi.org/10.1007/s00438-005-0091-7|10.1007/s00438-005-0091-7]]
  
 Kaku H, Ogawa T (2001). Genetic Analysis of the relationship between the browning reaction and bacterial blight resistance gene //Xa3// in rice. J. Gen. Plant Pathol. 67: 228-230. DOI: [[https://doi.org/10.1007/PL00013017|10.1007/PL00013017]] Kaku H, Ogawa T (2001). Genetic Analysis of the relationship between the browning reaction and bacterial blight resistance gene //Xa3// in rice. J. Gen. Plant Pathol. 67: 228-230. DOI: [[https://doi.org/10.1007/PL00013017|10.1007/PL00013017]]
  
-Kaur R, Grewal N, Das A, Vikal Y, Singh J, Bharaj TS, Sidhu JS, Singh K (2005). Inheritance of bacterial blight resistance in two accessions of wild rice, //Oryza nivara//. Rice Genet. Newsl. 22: 78. Full text @ [[https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol22/v23.html|Oryzagene]]+Kaur R, Grewal N, Das A, Vikal Y, Singh J, Bharaj TS, Sidhu JS, Singh K (2005). Inheritance of bacterial blight resistance in two accessions of wild rice, //Oryza nivara//. Rice Genet. Newsl. 22: 78. Full text @ [[https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol22/v23.html|Oryzabase]]
  
-Khush GS, Angeles ER (1999). A new gene for resistance to race 6 of bacterial blight in rice, //Oryza sativa//. Rice Genet. Newsl. 16: 92-93. Full text @ [[https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol16/v16p92.html|Oryzagene]] and @ [[https://archive.gramene.org/newsletters/rice_genetics/rgn16/v16p92.html|Gramene]]+Khush GS, Angeles ER (1999). A new gene for resistance to race 6 of bacterial blight in rice, //Oryza sativa//. Rice Genet. Newsl. 16: 92-93. Full text @ [[https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol16/v16p92.html|Oryzabase]] and @ [[https://archive.gramene.org/newsletters/rice_genetics/rgn16/v16p92.html|Gramene]] 
 + 
 +Khush GS, Bacalangco E, Ogawa T (1990). A new gene for resistance to bacterial blight from //Oryza longistaminata//. Rice Genet. Newsl. 7: 121-122. Full text @ [[https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol7/v7p122.html|Oryzabase]]
  
 Kim SM, Suh JP, Qin Y, Noh TH, Reinke RF, Jena KK (2015). Identification and fine-mapping of a new resistance gene, //Xa40//, conferring resistance to bacterial blight races in rice (//Oryza sativa// L.). Theor. Appl. Genet.128: 1933-1943. DOI: [[https://doi.org/10.1007/s00122-015-2557-2|10.1007/s00122-015-2557-2]] Kim SM, Suh JP, Qin Y, Noh TH, Reinke RF, Jena KK (2015). Identification and fine-mapping of a new resistance gene, //Xa40//, conferring resistance to bacterial blight races in rice (//Oryza sativa// L.). Theor. Appl. Genet.128: 1933-1943. DOI: [[https://doi.org/10.1007/s00122-015-2557-2|10.1007/s00122-015-2557-2]]
Line 1312: Line 1313:
 Kurata N, Yamazaki Y (2006). Oryzabase. An integrated biological and genome information database for rice. Plant Physiol. 140: 12-17. DOI: [[https://doi.org/10.1104/pp.105.063008|10.1104/pp.105.063008]] Kurata N, Yamazaki Y (2006). Oryzabase. An integrated biological and genome information database for rice. Plant Physiol. 140: 12-17. DOI: [[https://doi.org/10.1104/pp.105.063008|10.1104/pp.105.063008]]
  
-Lee KS, Khush GS (2000). Genetic analysis of resistance to bacterial blight, //Xanthomonas oryzae// pv. //oryzae// rice. Rice Genet. Newsl. 17: 72. Full text @ [[https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol17/d28.html|Oryzagene]] and @ [[https://archive.gramene.org/newsletters/rice_genetics/rgn17/d28.html|Gramene]]+Lee KS, Khush GS (2000). Genetic analysis of resistance to bacterial blight, //Xanthomonas oryzae// pv. //oryzae// rice. Rice Genet. Newsl. 17: 72. Full text @ [[https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol17/d28.html|Oryzabase]] and @ [[https://archive.gramene.org/newsletters/rice_genetics/rgn17/d28.html|Gramene]]
  
 Lee KS, Rasabandith S, Angeles ER, Khush GS (2003). Inheritance of resistance to bacterial blight in 21 cultivars of rice. Phytopathology 93: 147-152. DOI: [[https://doi.org/10.1094/PHYTO.2003.93.2.147|10.1094/PHYTO.2003.93.2.147]] Lee KS, Rasabandith S, Angeles ER, Khush GS (2003). Inheritance of resistance to bacterial blight in 21 cultivars of rice. Phytopathology 93: 147-152. DOI: [[https://doi.org/10.1094/PHYTO.2003.93.2.147|10.1094/PHYTO.2003.93.2.147]]
Line 1331: Line 1332:
  
 Luo D, Huguet-Tapia JC, Taylor Raborn R, White FF, Brendel VP, Yang B (2021). The //Xa7// resistance gene guards the susceptibility gene //SWEET14// of rice against exploitation by bacterial blight pathogen. Nat. Commun. 2: 100164. DOI: [[https://doi.org/10.1016/j.xplc.2021.100164|10.1016/j.xplc.2021.100164]] Luo D, Huguet-Tapia JC, Taylor Raborn R, White FF, Brendel VP, Yang B (2021). The //Xa7// resistance gene guards the susceptibility gene //SWEET14// of rice against exploitation by bacterial blight pathogen. Nat. Commun. 2: 100164. DOI: [[https://doi.org/10.1016/j.xplc.2021.100164|10.1016/j.xplc.2021.100164]]
- 
-Mew TW (1987). Current status and future prospects of research on bacterial blight of rice. Annu. Rev. Phytopathol. 25: 359-382. DOI: [[https://doi.org/10.1146/annurev.py.25.090187.002043|10.1146/annurev.py.25.090187.002043]] 
  
 Miao LL, Wang CL, Zheng C, Che JY, Gao Y, Wen YC, Li GQ, Zhao K (2010). Molecular mapping of a new gene for resistance to rice bacterial blight. Sci. Agric. Sin. 43: 3051-3058. Miao LL, Wang CL, Zheng C, Che JY, Gao Y, Wen YC, Li GQ, Zhao K (2010). Molecular mapping of a new gene for resistance to rice bacterial blight. Sci. Agric. Sin. 43: 3051-3058.
Line 1343: Line 1342:
  
 Neelam K, Mahajan R, Gupta V, Bhatia D, Gill BK, Komal R, Lore JS, Mangat GS, Singh K (2020). High-resolution genetic mapping of a novel bacterial blight resistance gene //xa-45 (t)// identified from //Oryza glaberrima// and transferred to //Oryza sativa//. Theor. Appl. Genet. 133: 689-705. DOI: [[https://doi.org/10.1007/s00122-019-03501-2|10.1007/s00122-019-03501-2]] Neelam K, Mahajan R, Gupta V, Bhatia D, Gill BK, Komal R, Lore JS, Mangat GS, Singh K (2020). High-resolution genetic mapping of a novel bacterial blight resistance gene //xa-45 (t)// identified from //Oryza glaberrima// and transferred to //Oryza sativa//. Theor. Appl. Genet. 133: 689-705. DOI: [[https://doi.org/10.1007/s00122-019-03501-2|10.1007/s00122-019-03501-2]]
 +
 +Ogawa T, Kaku H, Yamamoto T (1989). Resistance gene of rice cultivar Asominori to bacterial blight of rice. Jpn. J. Breed. 39: S196-S197.
 +
 +Ogawa T, Morinaka T, Fujii K, Kimura T (1978). Inheritance of resistance of rice varieties Kogyoku and Java 14 to bacterial group V of //Xanthomonas oryzae//. Jpn. J. Phytopathol. 44: 137-141.
 +
 +Ogawa T, Yamamoto T (1986). Inheritance of resistance to bacterial blight in rice. //In:// Rice Genetics. Proc. Intl. Rice Genet. Symp., IRRI, Manila, The Philippines, 471-480.
  
 Ogawa T, Yamamoto T, Khush GS, Mew TW (1986a). The //Xa-3// gene for resistance to Philippine races of bacterial blight of rice. Rice Genet. Newsl. 3: 77. Full text @ [[https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol3/v3V28.html|Oryzabase]] and @ [[https://archive.gramene.org/newsletters/rice_genetics/rgn3/v3V28.html|Gramene]] Ogawa T, Yamamoto T, Khush GS, Mew TW (1986a). The //Xa-3// gene for resistance to Philippine races of bacterial blight of rice. Rice Genet. Newsl. 3: 77. Full text @ [[https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol3/v3V28.html|Oryzabase]] and @ [[https://archive.gramene.org/newsletters/rice_genetics/rgn3/v3V28.html|Gramene]]
Line 1349: Line 1354:
  
 Ogawa T, Yamamoto T, Khush GS, Mew TW, Kaku H (1988). Near-isogenic lines as international differentials for resistance to bacterial blight of rice. Rice Genet. Newsl. 5: 106-109. Full text @ [[https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol5/v5V31.html|Oryzabase]] Ogawa T, Yamamoto T, Khush GS, Mew TW, Kaku H (1988). Near-isogenic lines as international differentials for resistance to bacterial blight of rice. Rice Genet. Newsl. 5: 106-109. Full text @ [[https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol5/v5V31.html|Oryzabase]]
 +
 +Ogawa T, Yamamoto T, Khush GS, Mew TW (1991). Resistance and its inheritance to bacterial blight of IR8 rice cultivar group. Jpn. J. Breed. 41: 211-221.
  
 Porter BW, Chittoor JM, Yano M, Sasaki T, White FF (2003). Development and mapping of markers linked to the rice bacterial blight resistance gene //Xa7//. Crop Sci. 43: 1484-1492. DOI: [[https://doi.org/10.2135/cropsci2003.1484|10.2135/cropsci2003.1484]] Porter BW, Chittoor JM, Yano M, Sasaki T, White FF (2003). Development and mapping of markers linked to the rice bacterial blight resistance gene //Xa7//. Crop Sci. 43: 1484-1492. DOI: [[https://doi.org/10.2135/cropsci2003.1484|10.2135/cropsci2003.1484]]
Line 1380: Line 1387:
 Streubel J, Pesce C, Hutin M, Koebnik R, Boch J, Szurek B (2013). Five phylogenetically close rice //SWEET// genes confer TAL effector-mediated susceptibility to //Xanthomonas oryzae// pv. //oryzae//. New Phytol. 200: 808-819. DOI: [[https://doi.org/10.1111/nph.12411|10.1111/nph.12411]] Streubel J, Pesce C, Hutin M, Koebnik R, Boch J, Szurek B (2013). Five phylogenetically close rice //SWEET// genes confer TAL effector-mediated susceptibility to //Xanthomonas oryzae// pv. //oryzae//. New Phytol. 200: 808-819. DOI: [[https://doi.org/10.1111/nph.12411|10.1111/nph.12411]]
  
-Sugio A, Yang B, Zhu T, White FF (2007). Two type III effector genes of //Xanthomonas oryzae// pv. //oryzae// control the induction of the host genes OsTFIIAgamma1 and OsTFX1 during bacterial blight of rice. Proc Natl. Acad. Sci. U. S. A. 104: 10720-10725. DOI: [[https://doi.org/10.1073/pnas.0701742104|10.1073/pnas.0701742104]]+Sugio A, Yang B, Zhu T, White FF (2007). Two type III effector genes of //Xanthomonas oryzae// pv. //oryzae// control the induction of the host genes //OsTFIIAγ1// and //OsTFX1// during bacterial blight of rice. Proc Natl. Acad. Sci. U. S. A. 104: 10720-10725. DOI: [[https://doi.org/10.1073/pnas.0701742104|10.1073/pnas.0701742104]]
  
 Sun X, Yang Z, Wang S, Zhang Q (2003). Identification of a 47-kb DNA fragment containing //Xa4//, a locus for bacterial blight resistance in rice. Theor. Appl. Genet. 106: 683-687. DOI: [[https://doi.org/10.1007/s00122-002-1117-8|10.1007/s00122-002-1117-8]] Sun X, Yang Z, Wang S, Zhang Q (2003). Identification of a 47-kb DNA fragment containing //Xa4//, a locus for bacterial blight resistance in rice. Theor. Appl. Genet. 106: 683-687. DOI: [[https://doi.org/10.1007/s00122-002-1117-8|10.1007/s00122-002-1117-8]]
Line 1389: Line 1396:
  
 Taura S, Ichitani K (2023). Chromosomal location of //xa19//, a broad-spectrum rice bacterial blight resistant gene from XM5, a mutant line from IR24. Plants (Basel) 12: 602. DOI: [[https://doi.org/10.3390/plants12030602|10.3390/plants12030602]] Taura S, Ichitani K (2023). Chromosomal location of //xa19//, a broad-spectrum rice bacterial blight resistant gene from XM5, a mutant line from IR24. Plants (Basel) 12: 602. DOI: [[https://doi.org/10.3390/plants12030602|10.3390/plants12030602]]
 +
 +Taura S, Ogawa T, Tabien RE, Khush GS, Yoshimura A, Omura T (1987). The specific reaction of Taichung Native 1 to Philippine races of bacterial blight and inheritance of resistance to race 5 (PXO 112). Rice Genet. Newsl. 4: 101-102. Full text @ [[https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol4/v4p101.html|Oryzabase]]
  
 Taura S, Ogawa T, Yoshimura A, Ikea R, Omura T (1991). Identification of a recessive resistance gene in induced mutant line XM5 of rice to rice bacterial blight. Japan. J. Breed. 41: 427-432. DOI: [[https://doi.org/10.1270/jsbbs1951.41.427|10.1270/jsbbs1951.41.427]] Taura S, Ogawa T, Yoshimura A, Ikea R, Omura T (1991). Identification of a recessive resistance gene in induced mutant line XM5 of rice to rice bacterial blight. Japan. J. Breed. 41: 427-432. DOI: [[https://doi.org/10.1270/jsbbs1951.41.427|10.1270/jsbbs1951.41.427]]
Line 1497: Line 1506:
  
 Lore JS, Pinili D, Bhatia D, Balloyan LR, Navea IP, Hunjan MS, Mangat GS, Singh R, Platten JD, Yang B, Leach JE, White FF, Vera Cruz CM, Schepler-Luu V (2025). Pathogen-informed strategies for durable resistance in rice: lessons from bacterial blight. Annu. Rev. Phytopathol. 63: 247-277. DOI: [[https://doi.org/10.1146/annurev-phyto-121923-080533|10.1146/annurev-phyto-121923-080533]] Lore JS, Pinili D, Bhatia D, Balloyan LR, Navea IP, Hunjan MS, Mangat GS, Singh R, Platten JD, Yang B, Leach JE, White FF, Vera Cruz CM, Schepler-Luu V (2025). Pathogen-informed strategies for durable resistance in rice: lessons from bacterial blight. Annu. Rev. Phytopathol. 63: 247-277. DOI: [[https://doi.org/10.1146/annurev-phyto-121923-080533|10.1146/annurev-phyto-121923-080533]]
 +
 +Mew TW (1987). Current status and future prospects of research on bacterial blight of rice. Annu. Rev. Phytopathol. 25: 359-382. DOI: [[https://doi.org/10.1146/annurev.py.25.090187.002043|10.1146/annurev.py.25.090187.002043]]
  
 Park CJ, Han SW, Chen X, Ronald PC (2010). Elucidation of XA21-mediated innate immunity. Cell. Microbiol. 12: 1017-1025. DOI: [[https://doi.org/10.1111/j.1462-5822.2010.01489.x|10.1111/j.1462-5822.2010.01489.x]] Park CJ, Han SW, Chen X, Ronald PC (2010). Elucidation of XA21-mediated innate immunity. Cell. Microbiol. 12: 1017-1025. DOI: [[https://doi.org/10.1111/j.1462-5822.2010.01489.x|10.1111/j.1462-5822.2010.01489.x]]
plant/rice.1759235290.txt.gz · Last modified: 2025/09/30 13:28 by rkoebnik

Page Tools

Except where otherwise noted, content on this wiki is licensed under the following license: CC Attribution-Share Alike 4.0 International
CC Attribution-Share Alike 4.0 International Donate Powered by PHP Valid HTML5 Valid CSS Driven by DokuWiki