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--- plant:bean [2020/06/11 15:45] – ritapf
+++ plant:bean [2025/02/12 22:12] (current) – jfpothier
@@ Line 1: / Line 1: @@
-====== Bean (//Phaseolus vulgaris// L.) ======
+====== Plant Resistance Genes in Common Bean (//Phaseolus vulgaris// L.) against //Xanthomonas// Infection ======
-Author: Massimiliano Morelli\\
+Author: [[https://www.researchgate.net/profile/Massimiliano_Morelli|Massimiliano Morelli]]\\
-Internal reviewer: Rita Fernandes\\
+Internal reviewer: Rita Fernandes
-Expert reviewer: FIXME
-===== Pathogen: //Xanthomonas axonopodis// pv. //phaseoli// (Xap) =====
+===== Pathogen: //Xanthomonas axonopodis// pv. //phaseoli// (//Xap//) =====
 ==== Resistance gene: //xap-1// ====
@@ Line 11: / Line 10: @@
 === Synonyms ===
-//NA//.
+//NA//
 === Source ===
-Bean cross between breeding line PR0313-58 and cultivar ‘Rosada Nativa’ (Zapata //et al//., 2011).
+Bean cross between breeding line PR0313-58 and cultivar ‘Rosada Nativa’ (Zapata //et al.//, 2011).
 === Status (identified, mapped, cloned, sequenced) ===
-Located on Linkage Group 10 (Zapata //et al//., 2011).
+Located on linkage group 10 (Zapata //et al.//, 2011).
 === Molecular markers ===
-SCAR marker (Zapata //et al//., 2011).
+SCAR marker (Zapata //et al.//, 2011).
 === Brief description ===
-Dominant resistance gene cosegregating with the SAP6 QTL (Zapata //et al//., 2011; Singh & Miklas, 2015).
+Dominant resistance gene cosegregating with the SAP6 QTL (Zapata //et al.//, 2011; Singh & Miklas, 2015).
 ----
-==== Resistance gene: // Phvul.010G128100 // ====
+==== Resistance gene: //Phvul.010G128100// ====
 === Synonyms ===
-//NA//.
+//NA//
 === Source ===
-Bean cross between cultivars Longyundou 5 and Longyundou 4 (Zhu, Jifeng, et al, 2016)
+Bean cross between cultivars Longyundou 5 and Longyundou 4 (Zhu //et al.//, 2016)
 === Status (identified, mapped, cloned, sequenced) ===
-identified on QTL on chromossome Pv10 (Zhu, Jifeng, et al, 2016)
+identified on QTL on chromossome Pv10 (Zhu //et al.//, 2016)
 === Molecular markers ===
-SAP6 (Zhu, Jifeng, et al, 2016)
+SAP6 (Zhu //et al.//, 2016)
 === Brief description ===
-One of other ten candidate genes associated with CBB resistance in the qCBB10-1 region (qCBB10-1 / SAP6 locus) that encode proteins involved in defense mechanisms against pathogens (Zhu, Jifeng, et al, 2016), Tugume, Joab K., et al. (2019).
+One of other ten candidate genes associated with CBB resistance in the qCBB10-1 region (qCBB10-1 / SAP6 locus) that encode proteins involved in defense mechanisms against pathogens (Zhu //et al.//, 2016; Tugume //et al.//, 2019).
 ----
@@ Line 52: / Line 48: @@
 ===== References =====
-Zapata M, Beaver JS, Porch TG (2011). Dominant gene for common bean resistance to common bacterial blight caused by //Xanthomonas axonopodis// pv. //phaseoli//. Euphytica 179: 373-382. DOI: [[https://doi.org/10.1007/s10681-010-0313-x|10.1007/s10681-010-0313-x]].
+Singh SP, Miklas PN (2015). Breeding common bean for resistance to common blight: a review. Crop Sci. 55: 971-984. DOI: [[https://doi.org/10.2135/cropsci2014.07.0502|10.2135/cropsci2014.07.0502]]
-Singh SP, Miklas PN (2015). Breeding common bean for resistance to common blight: A review. Crop Sci. 55: 971-984. DOI: [[https://doi.org/10.2135/cropsci2014.07.0502|10.2135/cropsci2014.07.0502]].
+Tugume JK, Tusiime G, Sekamate AM, Buruchara R, Mukankusi CM (2019). Diversity and interaction of common bacterial blight disease-causing bacteria (//Xanthomonas// spp.) with //Phaseolus vulgaris// L. Crop J. 7: 1-7. DOI: [[https://doi.org/10.1016/j.cj.2018.10.002|10.1016/j.cj.2018.10.002]]
+Zapata M, Beaver JS, Porch TG (2011). Dominant gene for common bean resistance to common bacterial blight caused by //Xanthomonas axonopodis// pv. //phaseoli//. Euphytica 179: 373-382. DOI: [[https://doi.org/10.1007/s10681-010-0313-x|10.1007/s10681-010-0313-x]]
+Zhu J, Wu J, Wang L, Blair MW, Zhu Z, Wang S (2016). QTL and candidate genes associated with common bacterial blight resistance in the common bean cultivar Longyundou 5 from China. Crop J. 4: 344-352. DOI: [[https://doi.org/10.1016/j.cj.2016.06.009|10.1016/j.cj.2016.06.009]]
+----
+===== Further reading =====
+dos Santos Trindade R, Rodrigues R, do Amaral Jr AT, Azeredo Goncalves LS, Figueiredo Daher R, Pombo Sudré C (2012). Critical disease components of common bacterial blight to effectively evaluate resistant genotypes of snap bean. J. Gen. Plant Pathol. 78: 201-206. DOI: [[https://doi.org/10.1007/s10327-012-0374-x|10.1007/s10327-012-0374-x ]]
+Duncan RW, Singh SP, Gilbertson RL (2011). Interaction of common bacterial blight bacteria with disease resistance quantitative trait loci in common bean. Phytopathology 101: 425-435. DOI: [[https://doi.org/10.1094/PHYTO-03-10-0095|10.1094/PHYTO-03-10-0095]]
+Foucher J, Ruh M, Briand M, Préveaux A, Barbazange F, Boureau T, Jacques MA, Chen NWG (2022). Improving common bacterial blight phenotyping by using rub inoculation and machine learning: cheaper, better, faster, stronger. Phytopathology 112: 691-699. DOI: [[https://doi.org/10.1094/PHYTO-04-21-0129-R|10.1094/PHYTO-04-21-0129-R]]
+Foucher J, Ruh M, Préveaux A, Carrère S, Pelletier S, Briand M, Serre RF, Jacques MA, Chen NWG (2020). Common bean resistance to //Xanthomonas// is associated with upregulation of the salicylic acid pathway and downregulation of photosynthesis. BMC Genomics 21: 566. DOI: [[https://doi.org/10.1186/s12864-020-06972-6|10.1186/s12864-020-06972-6]]. Erratum in: BMC Genomics (2020) 21: 657. DOI: [[https://doi.org/10.1186/s12864-020-07043-6|10.1186/s12864-020-07043-6]]
+Girma F, Fininsa C, Terefe H, Amsalu B (2022). Evaluation of common bean (//Phaseolus vulgaris//) genotypes for resistance to common bacterial blight and angular leaf spot diseases, and agronomic performances. Heliyon 8: e10425. DOI: [[https://doi.org/10.1016/j.heliyon.2022.e10425|10.1016/j.heliyon.2022.e10425]]
+Monteiro ALR, Chaves FS, Pantaleão ASL, Carneiro PCS, de Souza Carneiro JE, Badel JL (2020). Sources, spectrum, genetics, and inheritance of //Phaseolus vulgaris// resistance against //Xanthomonas citri// pv. //fuscans//. Phytopathology 110: 1428-1436. DOI: [[https://doi.org/10.1094/PHYTO-01-20-0020-R|10.1094/PHYTO-01-20-0020-R]]
+Osdaghi E, Alizadeh A, Shams-Bakhsh M, Reza Lak M (2009). Evaluation of common bean lines for their reaction to the common bacterial blight pathogen. Phytopathol. Mediterr. 48: 461-468. [[https://oajournals.fupress.net/index.php/pm/article/view/5306|https://oajournals.fupress.net/index.php/pm/article/view/5306]]
+Osdaghi E, Shams-Bakhsh M, Alizadeh A, Reza Lak M, Hatami Maleki H (2011). Induction of resistance in common bean by //Rhizobium leguminosarum// bv. //phaseoli// and decrease of common bacterial blight. Phytopathol. Mediterr. 50: 45-54. [[https://oajournals.fupress.net/index.php/pm/article/view/5389|https://oajournals.fupress.net/index.php/pm/article/view/5389]]
+Perry G, Dinatale C, Xie W, Navabi A, Reinprecht Y, Crosby W, Yu K, Shi C, Pauls KP (2013). A comparison of the molecular organization of genomic regions associated with resistance to common bacterial blight in two //Phaseolus vulgaris// genotypes. Front. Plant Sci. 4: 318. DOI: [[https://doi.org/10.3389/fpls.2013.00318|10.3389/fpls.2013.00318]]
+Shi C, Navabi A, Yu K (2011). Association mapping of common bacterial blight resistance QTL in Ontario bean breeding populations. BMC Plant Biol. 11: 52. DOI: [[https://doi.org/10.1186/1471-2229-11-52|10.1186/1471-2229-11-52]]
+Shi C, Yu K, Xie W, Perry G, Navabi A, Pauls KP, Miklas PN, Fourie D (2012). Development of candidate gene markers associated to common bacterial blight resistance in common bean. Theor. Appl. Genet. 125: 1525-1537. DOI: [[https://doi.org/10.1007/s00122-012-1931-6|10.1007/s00122-012-1931-6]]
+Simons KJ, Oladzad A, Lamppa R, Maniruzzaman, McClean PE, Osorno JM, Pasche JS (2021). Using breeding populations with a dual purpose: cultivar development and gene mapping - a case study using resistance to common bacterial blight in dry bean (//Phaseolus vulgaris// L.). Front. Plant Sci. 12: 621097. DOI: [[https://doi.org/10.3389/fpls.2021.621097|10.3389/fpls.2021.621097]]
+Terán H, Jara C, Mahuku G, Beebe S, Singh SP (2012). Simultaneous selection for resistance to five bacterial, fungal, and viral diseases in three Andean × Middle American inter-gene pool common bean populations. Euphytica 189: 283-292. DOI: [[https://doi.org/10.1007/s10681-012-0803-0|10.1007/s10681-012-0803-0]]
+Vandemark GJ, Fourie D, Miklas PN (2008). Genotyping with real-time PCR reveals recessive epistasis between independent QTL conferring resistance to common bacterial blight in dry bean. Theor. Appl. Genet. 117: 513-522. DOI: [[https://doi.org/10.1007/s00122-008-0795-2|10.1007/s00122-008-0795-2]]
+Xie W, Yu K, Pauls KP, Navabi A (2012). Application of image analysis in studies of quantitative disease resistance, exemplified using common bacterial blight-common bean pathosystem. Phytopathology 102: 434-442. doi: [[https://doi.org/10.1094/PHYTO-06-11-0175|10.1094/PHYTO-06-11-0175]]
+----
-Zhu, J., Wu, J., Wang, L., Blair, M. W., Zhu, Z., & Wang, S. (2016). QTL and candidate genes associated with common bacterial blight resistance in the common bean cultivar Longyundou 5 from China. //The crop journal//, //4// (5), 344-352. DOI: [[https://doi.org/10.1016/j.cj.2016.06.009|10.1016/j.cj.2016.06.009]]
+===== Acknowledgements =====
-Tugume, J. K., Tusiime, G., Sekamate, A. M., Buruchara, R., & Mukankusi, C. M. (2019). Diversity and interaction of common bacterial blight disease-causing bacteria (Xanthomonas spp.) with Phaseolus vulgaris L. //The Crop Journal//, //7// (1), 1-7. DOI: [[https://doi.org/10.1016/j.cj.2018.10.002|10.1016/j.cj.2018.10.002]]
+This fact sheet is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology).

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