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plant:banana [2024/08/06 15:46] – rkoebnikplant:banana [2025/07/05 14:26] (current) – jfpothier
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 Author: Rita Fernandes\\ Author: Rita Fernandes\\
-Internal reviewer: Noemi Casarin\\ +Internal reviewer: [[https://www.researchgate.net/profile/Noemi_Casarin2|Noemi Casarin]]\\ 
-Expert reviewer: **WANTED!**+
 ===== Pathogen: //Xanthomonas vasicola// pv. //musacearum// (//Xvm//) ===== ===== Pathogen: //Xanthomonas vasicola// pv. //musacearum// (//Xvm//) =====
  
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 === Synonyms === === Synonyms ===
  
-GER1, GLP1, Ma02_g20530.1, [[https://banana-genome-hub.southgreen.fr/jbrowse_ma2/?loc=chr09:10823178..10825807|Ma09_p15510.1]], //LOC103998053, LOC103976190//.+GER1, GLP1, Ma02_g20530.1, [[https://banana-genome-hub.southgreen.fr/jbrowse_ma2/?loc=chr09:10823178..10825807|Ma09_p15510.1]], LOC103998053, LOC103976190. 
 === Source === === Source ===
  
-//Musa alcuminata// [[https://www.ncbi.nlm.nih.gov/taxonomy/214687|subsp//. malaccensis//]]. +//Musa alcuminata// subsp. //malaccensis//.
 === Status (identified, mapped, cloned, sequenced) === === Status (identified, mapped, cloned, sequenced) ===
  
 Identified (Tripathi //et al//., 2019), mapped on chromosome 2 and 9, sequenced (D'Hont //et al//., 2012; Hubert //et al//., 2014). Identified (Tripathi //et al//., 2019), mapped on chromosome 2 and 9, sequenced (D'Hont //et al//., 2012; Hubert //et al//., 2014).
 +
 === Molecular markers === === Molecular markers ===
  
 //NA// //NA//
 +
 === Brief description === === Brief description ===
  
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 === Source === === Source ===
  
-//Musa alcuminata// [[https://www.ncbi.nlm.nih.gov/taxonomy/214687|subsp//. malaccensis//]].+//Musa alcuminata// subsp. //malaccensis//.
  
 === Status (identified, mapped, cloned, sequenced) === === Status (identified, mapped, cloned, sequenced) ===
  
 Identified, mapped on chromosome 9, sequenced (D'Hont //et al//., 2012). Identified, mapped on chromosome 9, sequenced (D'Hont //et al//., 2012).
 +
 === Molecular markers === === Molecular markers ===
  
 //NA// //NA//
 +
 === Brief description === === Brief description ===
  
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 === Source === === Source ===
  
-//Musa alcuminata// [[https://www.ncbi.nlm.nih.gov/taxonomy/214687|//subsp. malaccensis//]].+//Musa alcuminata// subsp. //malaccensis//.
  
 === Status (identified, mapped, cloned, sequenced) === === Status (identified, mapped, cloned, sequenced) ===
  
 Identified (Tripathi //et al//., 2019), mapped on chromosome 2 and 9, sequenced (D'Hont //et al//., 2012; Hubert //et al//., 2014). Identified (Tripathi //et al//., 2019), mapped on chromosome 2 and 9, sequenced (D'Hont //et al//., 2012; Hubert //et al//., 2014).
 +
 === Molecular markers === === Molecular markers ===
  
 //NA// //NA//
 +
 === Brief description === === Brief description ===
  
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 //Musa alcuminata// subsp. //malaccensis//. //Musa alcuminata// subsp. //malaccensis//.
 +
 === Status (identified, mapped, cloned, sequenced) === === Status (identified, mapped, cloned, sequenced) ===
  
 Identified, mapped on chromosome 5, sequenced (Medina-Suárez //et al//., 1997; D'Hont //et al//., 2012; Hubert //et al//., 2014). Identified, mapped on chromosome 5, sequenced (Medina-Suárez //et al//., 1997; D'Hont //et al//., 2012; Hubert //et al//., 2014).
 +
 === Molecular markers === === Molecular markers ===
  
 //NA// //NA//
 +
 === Brief description === === Brief description ===
  
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 //Musa alcuminata// subsp. //malaccensis//. //Musa alcuminata// subsp. //malaccensis//.
 +
 === Status (identified, mapped, cloned, sequenced) === === Status (identified, mapped, cloned, sequenced) ===
  
 Identified, mapped on chromosome 4, sequenced (D'Hont //et al//., 2012). Identified, mapped on chromosome 4, sequenced (D'Hont //et al//., 2012).
 +
 === Molecular markers === === Molecular markers ===
  
 //NA// //NA//
 +
 === Brief description === === Brief description ===
  
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 Ma06_t14360.1 (Tripathi //et al//., 2019), LOC103987676, XM_009406048.2, GSMUA_Achr6G12900_001. Ma06_t14360.1 (Tripathi //et al//., 2019), LOC103987676, XM_009406048.2, GSMUA_Achr6G12900_001.
 +
 === Source === === Source ===
  
 //Musa alcuminata// subsp. //malaccensis//. //Musa alcuminata// subsp. //malaccensis//.
 +
 === Status (identified, mapped, cloned, sequenced) === === Status (identified, mapped, cloned, sequenced) ===
  
 Identified, mapped on chromosome 6, sequenced (Medina-Suárez //et al//., 1997; D'Hont //et al//., 2012; Hubert //et al//., 2014). Identified, mapped on chromosome 6, sequenced (Medina-Suárez //et al//., 1997; D'Hont //et al//., 2012; Hubert //et al//., 2014).
 +
 === Molecular markers === === Molecular markers ===
  
 //NA// //NA//
 +
 === Brief description === === Brief description ===
  
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 Identified, mapped on chromosome 6 (D'Hont //et al//., 2012; Hubert //et al//., 2014). Identified, mapped on chromosome 6 (D'Hont //et al//., 2012; Hubert //et al//., 2014).
 +
 === Molecular markers === === Molecular markers ===
  
 //NA// //NA//
 +
 === Brief description === === Brief description ===
  
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 //Musa alcuminata// subsp. //malaccensis//. //Musa alcuminata// subsp. //malaccensis//.
 +
 === Status (identified, mapped, cloned, sequenced) === === Status (identified, mapped, cloned, sequenced) ===
  
 Identified, mapped on chromosome 3, sequenced (D'Hont //et al//., 2012; Hubert //et al//., 2014). Identified, mapped on chromosome 3, sequenced (D'Hont //et al//., 2012; Hubert //et al//., 2014).
 +
 === Molecular markers === === Molecular markers ===
  
 //NA// //NA//
 +
 === Brief description === === Brief description ===
  
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 === Source === === Source ===
  
-Transformed into banana cultivars ‘Sukali Ndiizi’ and ‘Nakinyika’, but isolated from sweet pepper //(Capsicum annuum)// (Tripathi //et al//., 2019).+Transformed into banana cultivars ‘Sukali Ndiizi’ and ‘Nakinyika’, but isolated from sweet pepper (//Capsicum annuum//) (Tripathi //et al//., 2019). 
 === Status (identified, mapped, cloned, sequenced) === === Status (identified, mapped, cloned, sequenced) ===
  
 Identified, mapped on chromosome 7 (of sweet pepper) and sequenced (Chen //et al//., 2000; Qin //et al//., 2014). Identified, mapped on chromosome 7 (of sweet pepper) and sequenced (Chen //et al//., 2000; Qin //et al//., 2014).
 +
 === Molecular markers === === Molecular markers ===
  
 //NA// //NA//
 +
 === Brief description === === Brief description ===
  
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 === Source === === Source ===
  
-Transformed into banana cultivars ‘Sukali Ndiizi’ and ‘Nakinyika’, but isolated from sweet pepper //(Capsicum annuum)// (Namukwaya //et al//., 2012).+Transformed into banana cultivars ‘Sukali Ndiizi’ and ‘Nakinyika’, but isolated from sweet pepper (//Capsicum annuum//) (Namukwaya //et al//., 2012). 
 === Status (identified, mapped, cloned, sequenced) === === Status (identified, mapped, cloned, sequenced) ===
  
 Mapped on chromosome 8 of sweet pepper (//Capsicum annuum)//, sequenced (Dayakar //et al//., 2003; Qin //et al//., 2014). Mapped on chromosome 8 of sweet pepper (//Capsicum annuum)//, sequenced (Dayakar //et al//., 2003; Qin //et al//., 2014).
 +
 === Molecular markers === === Molecular markers ===
  
 //NA// //NA//
 +
 === Brief description === === Brief description ===
  
 Encodes for ferredoxin-like protein (member of photosynthesis proteins), chloroplastic. Known resistance against various bacterial pathogens like //Erwinia//, //Pseudomonas//, //Ralstonia//, and //Xanthomonas// spp. in other plants. Over-expression of this gene leads to intensified production of active oxygen species (AOS) and activation of the hypersensitive response (HR) when plants are challenged with bacterial pathogens (Namukwaya //et al//., 2012). Encodes for ferredoxin-like protein (member of photosynthesis proteins), chloroplastic. Known resistance against various bacterial pathogens like //Erwinia//, //Pseudomonas//, //Ralstonia//, and //Xanthomonas// spp. in other plants. Over-expression of this gene leads to intensified production of active oxygen species (AOS) and activation of the hypersensitive response (HR) when plants are challenged with bacterial pathogens (Namukwaya //et al//., 2012).
 +
 +----
 +
 +==== Resistance gene: //MusaPUB22/23// ====
 +
 +=== Synonyms ===
 +
 +//NA//
 +
 +=== Source ===
 +
 +Susceptibility genes in the BXW-susceptible 'Sukali Ndiizi' cultivar (Tripathi //et al//., 2025).
 +
 +=== Status (identified, mapped, cloned, sequenced) ===
 +
 +Identified and sequenced (Tripathi //et al//., 2025).
 +
 +=== Molecular markers ===
 +
 +Edited genes (Tripathi //et al//., 2025)
 +
 +=== Brief description ===
 +
 +Genes //MusaPUB22// and //MusaPUB23// were identified through prior comparative transcriptomics analysis, which revealed their upregulation in susceptible versus resistant genotypes during early infection with //Xvm//. Several gene edited lines displayed complete resistance to //Xvm// infection, while others showed partial resistance, in contrast to the full susceptibility of wild-type controls. Resistance correlated with hydrogen peroxide accumulation and activation of key defense-related genes, indicating enhanced immune responses (Tripathi //et al.//, 2025).
  
 ---- ----
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 Tripathi L, Tripathi JN, Shah T, Muiruri KS, Katari M (2019). Molecular basis of disease resistance in banana progenitor //Musa balbisiana// against //Xanthomonas campestris// pv. //musacearum//. Sci. Rep. 9: 7007. DOI: [[https://doi.org/10.1038/s41598-019-43421-1|10.1038/s41598-019-43421-1]] Tripathi L, Tripathi JN, Shah T, Muiruri KS, Katari M (2019). Molecular basis of disease resistance in banana progenitor //Musa balbisiana// against //Xanthomonas campestris// pv. //musacearum//. Sci. Rep. 9: 7007. DOI: [[https://doi.org/10.1038/s41598-019-43421-1|10.1038/s41598-019-43421-1]]
 +
 +Tripathi L, Ntui VO, Muiruri S, Shah T, Tripathi JN (2025). Loss of function of //MusaPUB// genes in banana can provide enhanced resistance to bacterial wilt disease. Commun. Biol. 8: 708. DOI: [[https://doi.org/10.1038/s42003-025-08093-w|10.1038/s42003-025-08093-w]]
  
 ---- ----
plant/banana.1722955609.txt.gz · Last modified: 2024/08/06 15:46 by rkoebnik

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