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Molecular Diagnosis and Diversity for Regulated Xanthomonas
Bacterial virulence factors
This DokuWiki is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology)
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Tools for molecular typing of regulated Xanthomonas.
| Pathogen | Fingerprints | VNTR/MLVA | CRISPR | MLSA/MLST |
|---|---|---|---|---|
| A1 list | ||||
| X. citri pv. aurantifolii | NA 1 | NA | NA | 1 |
| X. citri pv. citri | 2, 3 | 4, 5, 6 | 7 | 1, 2 |
| X. euvesicatoria pv. allii | 8, 9, 10, 11 | 13 | NA | 1 |
| X. oryzae pv. oryzae | 14 | 15 | NA | 16 |
| X. oryzae pv. oryzicola | NA | 15, 17 | NA | 16, 17 |
| A2 list | ||||
| X. arboricola pv. corylina | NA | 18, 19 | NA | 18 |
| X. arboricola pv. juglandis | 20, 21, 22 | 18 | NA | 18 |
| X. arboricola pv. pruni | 23 | 18, 22 | NA | 18, 23 |
| X. axonopodis pv. poinsettiicola | NA | NA | NA | 24 |
| X. euvesicatoria pv. euvesicatoria | 191,252] | 13 | NA | 191,1, ,252,253] |
| X. euvesicatoria pv. perforans | 191,252] | 13 | NA | 191,252] |
| X. fragariae | 254,255] | 192 ] | 192 ] | 192 ] |
| X. hortorum pv. gardneri | 191,252] | NA | NA | 191,252] |
| X. phaseoli pv. dieffenbachiae | 256,257] | NA | NA | 1 |
| X. phaseoli pv. phaseoliX. citri pv. fuscans | 258 ] | NA | NA | 1 |
| X. translucens pv. translucens | 259,260] | NA | NA | 261,262,263] |
| X. vesicatoria | 191,254] | NA | NA | 191,252,253] |
1 NA: not available.
