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Molecular Diagnosis and Diversity for Regulated Xanthomonas
Bacterial virulence factors
This DokuWiki is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology)
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This is an old revision of the document!
The original Xanthomonas.org resource can be found HERE .
EuroXanth COST Action CA16107 (Costa et al., 2021, 2022)
PhytoBacExplorer - Online resource for analysing and visualising genomic variation within plant-pathogenic bacteria
Pseudomonas–Plant Interaction website (Lindeberg et al., 2005)
RalstoT3Edb (Peeters et al., 2013; Sabbagh et al., 2019)
PaperBlast (Price & Arkin, 2017) - Find papers about a protein or its homologs
Costa J, Pothier JF, Boch J, Stefani E, Jacques MA, Catara V, Koebnik R (2021). Integrating science on Xanthomonadaceae for sustainable plant disease management in Europe. Mol. Plant Pathol. 22: 1461-1463. DOI: 10.1111/mpp.13150
Costa J, Pothier JF, Boch J, Stefani E, Koebnik R (2022). Integrating science on Xanthomonas and Xylella for integrated plant disease management. Microorganisms 11: 6. DOI: 10.3390/microorganisms11010006
Lindeberg M, Stavrinides J, Chang JH, Alfano JR, Collmer A, Dangl JL, Greenberg JT, Mansfield JW, Guttman DS (2005). Proposed guidelines for a unified nomenclature and phylogenetic analysis of type III Hop effector proteins in the plant pathogen Pseudomonas syringae. Mol. Plant Microbe Interact. 18: 275-282. DOI: 10.1094/MPMI-18-0275
Peeters N, Carrère S, Anisimova M, Plener L, Cazalé AC, Genin S (2013). Repertoire, unified nomenclature and evolution of the Type III effector gene set in the Ralstonia solanacearum species complex. BMC Genomics 14: 859. DOI: 10.1186/1471-2164-14-859
Price MN, Arkin AP (2017). PaperBLAST: text mining papers for information about homologs. mSystems 2: e00039-17. DOI: 10.1128/mSystems.00039-17
Sabbagh CRR, Carrere S, Lonjon F, Vailleau F, Macho AP, Genin S, Peeters N (2019). Pangenomic type III effector database of the plant pathogenic Ralstonia spp. PeerJ 7: e7346. DOI: 10.7717/peerj.7346
