====== Type III effectors from //Xanthomonas// ======

[[http://www.biopred.net/xanthomonas/|Link to the original Xanthomonas //Resource @ xanthomonas.org]]

[[:bacteria:t3e:effectors|Multi-FASTA-formatted list of type III effectors from Xanthomonas]]

[[https://www.ncbi.nlm.nih.gov/protein/WP_011037255.1, WP_039418336.1, WP_011052943.1, WP_039417318.1, WP_011347616.1, WP_041183113.1, WP_228949438.1, WP_011345998.1, WP_011347479.1, WP_011052114.1, WP_244170787.1, WP_260607984.1, WP_011346095.1, WP_011348008.1, WP_039005675.1, WP_011346758.1, WP_011038360.1, WP_084217840.1, WP_011345706.1, WP_010377341.1, WP_011346406.1, WP_010367684.1, WP_011347382.1, WP_074052319.1, WP_011346137.1, WP_008572727.1, WP_228442257.1, WP_196765268.1, WP_027703763.1, WP_218498620.1, WP_011346113.1, WP_011348010.1, WP_011346566.1, WP_104613784.1, WP_011349176.1, WP_011260681.1, WP_039418869.1, WP_199285673.1, WP_011408937.1, WP_011409498.1, WP_228329674.1, WP_011346212.1, WP_011408080.1, WP_011259177.1, WP_039421390.1, WP_041855088.1, WP_011409110.1, WP_011269629.1, WP_011409710.1, WP_011050288.1, WP_008577605.1, WP_227479740.1, WP_272820829.1, WP_007970248.1, WP_011037263.1, WP_011052119.1, WP_014504815.1, WP_269466020.1, WP_274360846.1, WP_012437264.1, WP_012438997.1, WP_162267513.1, WP_236504155.1, WP_233366621.1, APO95022.1, WP_229015407.1, AEL06363.1, WP_041855031.1, WP_065628638.1, WP_011269951.1, WP_011348129.1, WP_041854960.1, WP_104549896.1, WP_227478587.1, WP_251761698.1, WP_145953988.1?report=fasta|List of type III effectors in Xanthomonas]] (for download from NCBI)

[[http://www.pseudomonas-syringae.org|Pseudomonas–Plant Interaction website]] (Lindeberg //et al.//, 2005)

[[https://iant.toulouse.inra.fr/T3E|RalstoT3Edb]] (Peeters //et al.//, 2013; Sabbagh //et al.//, 2019)

[[:bacteria:t3e:effector_reviews|Review papers on type III effectors]]

[[:bacteria:t3e:software|Software, databases and websites for type III effectors]]

[[:bacteria:t3e:t3e_template|Empty template]] - [[:bacteria:t3e:xopau|Example 1: XopAU]] - [[:bacteria:t3e:xopb|Example 2: XopB]]

===== Xanthomonas type III effectors =====

^Class ^Family ^Synonyms ^Related proteins ^RefSeq ID (GenBank ID) ^Function / Features |
|AvrBs1 |[[:bacteria:t3e:avrbs1|AvrBs1]] |  |AvrA |[[https://www.ncbi.nlm.nih.gov/protein/WP_011037255.1|WP_011037255.1]] |  |
|AvrBs2 |[[:bacteria:t3e:avrbs2|AvrBs2]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_039418336.1|WP_039418336.1]] |[[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR030395/|Glycerophosphodiester phosphodiesterase domain]] |
|AvrBs3 |[[:bacteria:t3e:avrbs3|AvrBs3]] |PthA, PthB, PthN, PthXo, AvrXa7, AvrXa27, TALE |RipTAL |[[https://www.ncbi.nlm.nih.gov/protein/WP_011052943.1|WP_011052943.1]] |[[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR005042/|TAL effector repeat]]; Transcription activator in eukaryotic host cell; Nuclear localization |
|XopB |[[:bacteria:t3e:xopb|XopB]] |  |HopD1 (HopPtoD1, AvrPphD1), RipD |[[https://www.ncbi.nlm.nih.gov/protein/WP_039417318.1|WP_039417318.1]] |  |
|XopC |[[:bacteria:t3e:xopc|XopC1]] |  |RipC2 |[[https://www.ncbi.nlm.nih.gov/protein/WP_011347616.1|WP_011347616.1]] |[[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000836/|Phosphoribosyltransferase domain]]; [[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR041492/|Haloacid dehalogenase-like hydrolase]] |
|XopC |[[:bacteria:t3e:xopc|XopC2]] |  |RipC1 |[[https://www.ncbi.nlm.nih.gov/protein/WP_041183113.1|WP_041183113.1]] |  |
|XopD |[[:bacteria:t3e:xopd|XopD]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_228949438.1|WP_228949438.1]] |C48-family SUMO cysteine protease ([[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR003653/|Ulp1 protease family]]); EAR motif; DNA binding; Nuclear localization |
|XopE |[[:bacteria:t3e:xope1|XopE1]] |AvrXacE1 |HopX (AvrPphE), RipE1 |[[https://www.ncbi.nlm.nih.gov/protein/WP_011345998.1|WP_011345998.1]] |Putative transglutaminase |
|XopE |[[:bacteria:t3e:xope2|XopE2]] |AvrXacE3, AvrXccE1 |HopX (AvrPphE), RipE1 |[[https://www.ncbi.nlm.nih.gov/protein/WP_011347479.1|WP_011347479.1]] |Putative transglutaminase |
|XopE |[[:bacteria:t3e:xope3|XopE3]] |AvrXacE2 |HopX (AvrPphE), RipE1 |[[https://www.ncbi.nlm.nih.gov/protein/WP_011052114.1|WP_011052114.1]] |Putative transglutaminase |
|XopE |[[:bacteria:t3e:xope4|XopE4]] |  |RipE1 |[[https://www.ncbi.nlm.nih.gov/protein/WP_244170787.1|WP_244170787.1]] |Putative transglutaminase |
|XopE |[[:bacteria:t3e:xope5|XopE5]] |  |HopX (AvrPphE), RipE1 |[[https://www.ncbi.nlm.nih.gov/protein/WP_260607984.1|WP_260607984.1]] |Putative transglutaminase |
|XopF |[[:bacteria:t3e:xopf|XopF1]] |Hpa4 |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011346095.1|WP_011346095.1]] |  |
|XopF |[[:bacteria:t3e:xopf|XopF2]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011348008.1|WP_011348008.1]] |  |
|XopF |[[:bacteria:t3e:xopf|XopF3]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_039005675.1|WP_039005675.1]] |  |
|XopG |[[:bacteria:t3e:xopg|XopG1]] |  |HopH (HopPtoH), RipAX2 |[[https://www.ncbi.nlm.nih.gov/protein/WP_011346758.1|WP_011346758.1]] |[[https://www.ebi.ac.uk/interpro/entry/pfam/PF14891/|Peptidase_M91 superfamily]]; HEXXH motif, typical of zinc metallopeptidases |
|XopG |[[:bacteria:t3e:xopg|XopG2]] |  |HopH (HopPtoH), RipAX2 |[[https://www.ncbi.nlm.nih.gov/protein/WP_011038360.1|WP_011038360.1]] |[[https://www.ebi.ac.uk/interpro/entry/pfam/PF14891/|Peptidase_M91 superfamily]]; HEXXH motif, typical of zinc metallopeptidases |
|XopG |[[:bacteria:t3e:xopg|XopG3]] |  |HopH (HopPtoH), RipAX1 |[[https://www.ncbi.nlm.nih.gov/protein/WP_084217840.1|WP_084217840.1]] |[[https://www.ebi.ac.uk/interpro/entry/pfam/PF14891/|Peptidase_M91 superfamily]]; HEXXH motif, typical of zinc metallopeptidases |
|XopH |[[:bacteria:t3e:xoph|XopH1]] |AvrBs1.1, AvrBs7 |HopAO1 (HopPtoD2), RipBL |[[https://www.ncbi.nlm.nih.gov/protein/WP_011345706.1|WP_011345706.1]] |[[https://www.ebi.ac.uk/interpro/entry/pfam/PF14566/|Protein tyrosine phosphatase-like phytase]]; [[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000387/|Tyrosine-specific protein phosphatase]] |
|XopH |[[:bacteria:t3e:xoph|XopH2]] |  |HopAO1 (HopPtoD2), RipBL |[[https://www.ncbi.nlm.nih.gov/protein/WP_010377341.1|WP_010377341.1]] |[[https://www.ebi.ac.uk/interpro/entry/pfam/PF14566/|Protein tyrosine phosphatase-like phytase]]; [[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000387/|Tyrosine-specific protein phosphatase]] |
|XopI |[[:bacteria:t3e:xopi|XopI1]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011346406.1|WP_011346406.1]] |[[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001810/|F-box domain]] |
|XopI |[[:bacteria:t3e:xopi|XopI2]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_010367684.1|WP_010367684.1]] |[[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001810/|F-box domain]] |
|XopJ |[[:bacteria:t3e:xopj1|XopJ1]] |  |HopZ1, RipP1 |[[https://www.ncbi.nlm.nih.gov/protein/WP_011347382.1|WP_011347382.1]] |[[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR005083/|Ser/Thr acetyltransferase]] |
|XopJ |[[:bacteria:t3e:xopj2|XopJ2]] |AvrBsT |HopZ1, RipP1 |[[https://www.ncbi.nlm.nih.gov/protein/WP_074052319.1|WP_074052319.1]] |[[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR005083/|Ser/Thr acetyltransferase]] |
|XopJ |[[:bacteria:t3e:xopj3|XopJ3]] |AvrRxv |HopZ1, RipP1 |[[https://www.ncbi.nlm.nih.gov/protein/WP_011346137.1|WP_011346137.1]] |[[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR005083/|Ser/Thr acetyltransferase]] |
|XopJ |[[:bacteria:t3e:xopj4|XopJ4]] |AvrXv4 |HopZ1, RipP1 (formerly PopP1) |[[https://www.ncbi.nlm.nih.gov/protein/WP_008572727.1|WP_008572727.1]] |[[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR005083/|Ser/Thr acetyltransferase]] |
|XopJ |[[:bacteria:t3e:xopj5|XopJ5]] |AvrXccB |HopZ1, RipK, RipP1 |[[https://www.ncbi.nlm.nih.gov/protein/WP_228442257.1|WP_228442257.1]] |[[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR005083/|Ser/Thr acetyltransferase]] |
|XopJ |[[:bacteria:t3e:xopj6|XopJ6]] |  |RipP2 (formerly PopP2) |[[https://www.ncbi.nlm.nih.gov/protein/WP_196765268.1|WP_196765268.1]] |[[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR005083/|Ser/Thr acetyltransferase]] |
|XopK |[[:bacteria:t3e:xopk|XopK]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_027703763.1|WP_027703763.1]] |  |
|XopL |[[:bacteria:t3e:xopl|XopL]] |  |RipAC (formerly PopC) |[[https://www.ncbi.nlm.nih.gov/protein/WP_218498620.1|WP_218498620.1]] |[[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR003591/|LRR motif]]; [[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001611/|LRR domain]] |
|XopM |[[:bacteria:t3e:xopm|XopM]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011346113.1|WP_011346113.1]] |  |
|XopN |[[:bacteria:t3e:xopn|XopN]] |  |HopAU1 |[[https://www.ncbi.nlm.nih.gov/protein/WP_011348010.1|WP_011348010.1]] |ARM/HEAT repeat |
|XopO |[[:bacteria:t3e:xopo|XopO]] |  |HopK1 (HopPtoK, HolPtoAB) N-terminal domain, AvrRps4 |[[https://www.ncbi.nlm.nih.gov/protein/WP_011346566.1|WP_011346566.1]] |[[https://www.ebi.ac.uk/interpro/entry/cdd/CD21837/|AvrRps4 C-terminal region]] |
|XopP |[[:bacteria:t3e:xopp|XopP]] |  |RipH3 (formerly Hlk) |[[https://www.ncbi.nlm.nih.gov/protein/WP_104613784.1|WP_104613784.1]] |  |
|XopQ |[[:bacteria:t3e:xopq|XopQ]] |  |HopQ1 (HolPtoQ), RipB |[[https://www.ncbi.nlm.nih.gov/protein/WP_011349176.1|WP_011349176.1]] |[[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001910/|Inosine/uridine-preferring nucleoside hydrolase]] |
|XopR |[[:bacteria:t3e:xopr|XopR]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011260681.1|WP_011260681.1]] |  |
|XopS |[[:bacteria:t3e:xops|XopS]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_039418869.1|WP_039418869.1]] |  |
|XopT |[[:bacteria:t3e:xopt|XopT]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_199285673.1|WP_199285673.1]] |[[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR035915/|Plectin-repeat]] |
|XopU |[[:bacteria:t3e:xopu|XopU]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011408937.1|WP_011408937.1]] |  |
|XopV |[[:bacteria:t3e:xopv|XopV]] |  |RipAD |[[https://www.ncbi.nlm.nih.gov/protein/WP_011409498.1|WP_011409498.1]] |  |
|XopW |[[:bacteria:t3e:xopw|XopW]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_228329674.1|WP_228329674.1]] |  |
|XopX |[[:bacteria:t3e:xopx|XopX]] |  |HopAE1 (HolPsyAE), RipBI |[[https://www.ncbi.nlm.nih.gov/protein/WP_011346212.1|WP_011346212.1]] |  |
|XopY |[[:bacteria:t3e:xopy|XopY]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011408080.1|WP_011408080.1]] |  |
|XopZ |[[:bacteria:t3e:xopz|XopZ1]] |  |HopAS1 |[[https://www.ncbi.nlm.nih.gov/protein/WP_011259177.1|WP_011259177.1]] |  |
|XopZ |[[:bacteria:t3e:xopz|XopZ2]] |  |HopAS1 |[[http://www.ncbi.nlm.nih.gov/protein/WP_039421390.1|WP_039421390.1]] |  |
|XopAA |[[:bacteria:t3e:xopaa|XopAA]] |Ecf |HopAE1 (HolPsyAE), weakly related to RipBI |[[https://www.ncbi.nlm.nih.gov/protein/WP_041855088.1|WP_041855088.1]] |Early chlorosis factor; Proteasome/cyclosome repeat |
|XopAB |[[:bacteria:t3e:xopab|XopAB]] |  |weakly related to XopN |[[https://www.ncbi.nlm.nih.gov/protein/WP_011409110.1|WP_011409110.1]] |  |
|XopAC |[[:bacteria:t3e:xopac|XopAC]] |AvrAC |RipAC (formerly PopC) |[[https://www.ncbi.nlm.nih.gov/protein/WP_011269629.1|WP_011269629.1]] |[[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR003591/|LRR motif]]; [[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR032675/|LRR domain]]; [[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR003812/|Fido domain]]; Vascular hypersensitivity in //Arabidopsis// landrace Col-0  |
|XopAD |[[:bacteria:t3e:xopad|XopAD]] |  |RipS3 |[[https://www.ncbi.nlm.nih.gov/protein/WP_011409710.1|WP_011409710.1]] |SKWP repeat protein; [[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR011989/|Armadillo-like helical repeat]]; [[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR016024/|Armadillo-type fold]]; [[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR007685/|RelA/SpoT superfamily]] |
|XopAE |[[:bacteria:t3e:xopae|XopAE]] |HpaF/HpaG |RipAC (formerly PopC) |[[https://www.ncbi.nlm.nih.gov/protein/WP_011050288.1|WP_011050288.1]] |[[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR003591/|LRR motif]]; [[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR032675/|LRR domain]] |
|XopAF |[[:bacteria:t3e:xopaf|XopAF1]] |AvrXv3 |HopAF1 (HopPtoJ), RipBD |[[https://www.ncbi.nlm.nih.gov/protein/WP_008577605.1|WP_008577605.1]] |  |
|XopAF |[[:bacteria:t3e:xopaf|XopAF2]] |  |HopAF1 (HopPtoJ), RipBD |[[https://www.ncbi.nlm.nih.gov/protein/WP_227479740.1|WP_227479740.1]] |  |
|XopAG |[[:bacteria:t3e:xopag|XopAG1]] |AvrGf1 |HopG1 (HopPtoG), HolPtoW, RipO1 |[[https://www.ncbi.nlm.nih.gov/protein/WP_272820829.1|WP_272820829.1]] |  |
|XopAG |[[:bacteria:t3e:xopag|XopAG2]] |AvrGf2 |HopG1 (HopPtoG), HolPtoW, RipO1 |[[https://www.ncbi.nlm.nih.gov/protein/WP_007970248.1|WP_007970248.1]] |  |
|XopAH |[[:bacteria:t3e:xopah|XopAH]] |AvrXccC |AvrB/AvrC (AvrPphC) |[[https://www.ncbi.nlm.nih.gov/protein/WP_011037263.1|WP_011037263.1]] |[[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR008798/|AvrB/AvrC-family avirulence protein]] |
|XopAI |[[:bacteria:t3e:xopai|XopAI]] |  |HopO1 (HopPtoO, HopPtoS), HopAI1 (HolPtoAI) |[[https://www.ncbi.nlm.nih.gov/protein/WP_011052119.1|WP_011052119.1]] |[[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000768/|NAD:arginine ADP-ribosyltransferase]] |
|XopAJ |[[:bacteria:t3e:xopaj|XopAJ]] |AvrRxo1 |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_014504815.1|WP_014504815.1]] |[[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR027417/|P-loop containing nucleoside triphosphate hydrolase]] |
|XopAK |[[:bacteria:t3e:xopak|XopAK]] |  |HopK1 (HopPtoK, HolPtoAB) C-terminal domain, RipBQ |[[https://www.ncbi.nlm.nih.gov/protein/WP_269466020.1|WP_269466020.1]] |  |
|XopAL |[[:bacteria:t3e:xopal1|XopAL1]] |  |Eop3, weakly similar to HopX, RipE2 |[[https://www.ncbi.nlm.nih.gov/protein/WP_274360846.1|WP_274360846.1]] |  |
|XopAL |[[:bacteria:t3e:xopal2|XopAL2]] |  |Eop3, RS_T3E_Hyp14 |[[https://www.ncbi.nlm.nih.gov/protein/WP_012437264.1|WP_012437264.1]] |  |
|XopAM |[[:bacteria:t3e:xopam|XopAM]] |  |HopR1, RipR |[[https://www.ncbi.nlm.nih.gov/protein/WP_012438997.1|WP_012438997.1]] |AvrE-family effector |
|XopAN |[[:bacteria:t3e:xopan|XopAN]] |  |  |  |Replaced by XopAV |
|XopAO |[[:bacteria:t3e:xopao|XopAO]] |  |AvrRpm1, RipBA |[[https://www.ncbi.nlm.nih.gov/protein/WP_162267513.1|WP_162267513.1]] |  |
|XopAP |[[:bacteria:t3e:xopap|XopAP]] |  |RipAL |[[https://www.ncbi.nlm.nih.gov/protein/WP_236504155.1|WP_236504155.1]] |[[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR029058/|α/β hydrolase fold]]; [[https://www.ebi.ac.uk/interpro/entry/pfam/PF01764/|Class-3 lipase]] |
|XopAQ |[[:bacteria:t3e:xopaq|XopAQ]] |  |RipAH/RipAG |[[https://www.ncbi.nlm.nih.gov/protein/WP_233366621.1|WP_233366621.1]] |  |
|XopAR |[[:bacteria:t3e:xopar|XopAR]] |  |RipBE |[[https://www.ncbi.nlm.nih.gov/protein/APO95022.1|(APO95022.1)]] |  |
|XopAS |[[:bacteria:t3e:xopas|XopAS]] |  |HopAS1 |[[https://www.ncbi.nlm.nih.gov/protein/WP_229015407.1|WP_229015407.1]] |  |
|XopAT |[[:bacteria:t3e:xopat|XopAT]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/AEL06363.1|(AEL06363.1)]] |  |
|XopAU |[[:bacteria:t3e:xopau|XopAU]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_041855031.1|WP_041855031.1]] |Serine/threonine kinase; [[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000719/|Protein kinase domain]]; [[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR017441/|ATP-binding site]] |
|XopAV |[[:bacteria:t3e:xopav|XopAV1]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_065628638.1|WP_065628638.1]] |  |
|XopAV |[[:bacteria:t3e:xopav|XopAV2]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011269951.1|WP_011269951.1]] |  |
|XopAW |[[:bacteria:t3e:xopaw|XopAW]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011348129.1|WP_011348129.1]] |Calcium-binding protein; [[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR002048/|EF-hand domain]]; [[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR018247/|Calcium-binding site]] |
|XopAX |[[:bacteria:t3e:xopax|XopAX]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_041854960.1|WP_041854960.1]] |  |
|XopAY |[[:bacteria:t3e:xopay|XopAY]] |  |  |  |Replaced by XopAV |
|XopAZ |[[:bacteria:t3e:xopaz|XopAZ]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_104549896.1|WP_104549896.1]] |SlpA superfamily; [[https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001179/|FKBP-type peptidyl-prolyl cis-trans isomerase]] |
|XopBA |[[:bacteria:t3e:xopba|XopBA]] |  |HopW1, RipBP |[[https://www.ncbi.nlm.nih.gov/protein/WP_227478587.1|WP_227478587.1]] |  |
|XopBB |[[:bacteria:t3e:xopbb|XopBB]] |  |HopF2 (AvrPphF) |[[https://www.ncbi.nlm.nih.gov/protein/WP_251761698.1|WP_251761698.1]] |  |
|XopBC |  |  |  |  |= XopAV class |
|XopBD |  |  |  |  |= XopAT class |
|XopBE |  |  |  |  |= XopC class |
|XopBF |  |  |  |  |= XopAV class |
|XopBG |[[:bacteria:t3e:xopbg|XopBG]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_145953988.1|WP_145953988.1]] |  |


===== Avirulence or type III-secreted proteins that are not considered effectors in a narrow sense =====

^Name ^Synonyms ^Related proteins ^RefSeq ID (GenBank ID) ^Function / Features ^Reference |
|AvrXccA1 |AvrXca |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011039290.1|WP_011039290.1]] |Avirulence protein, perhaps not a T3E |Parker //et al.//, 1993  |
|AvrXccA2 |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_274318562.1|WP_274318562.1]] |Avirulence protein, perhaps not a T3E |  |
|HpaA |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011346100.1|WP_011346100.1]] |Type III secretion control protein, perhaps not a T3E |Lorenz //et al.//, 2008  |
|HpaT |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_058196718.1|WP_058196718.1]] |Putative translocon protein, not a T3E |Pesce //et al.//, 2017  |
|HrpB2 |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_008575450.1|WP_008575450.1]] |Putative inner rod protein, not a T3E |Rossier //et al.//, 2000; Scheibner //et al.//, 2016  |
|HrpE |HrpE1 |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011346098.1|WP_011346098.1]] |Major subunit of the Hrp pilus |Weber //et al.//, 2005; Weber & Koebnik, 2005; Weber & Koebnik, 2006; Gottig //et al.//, 2018  |
|HrpF |  |RipF (formerly PopF) |[[https://www.ncbi.nlm.nih.gov/protein/WP_011346092.1|WP_011346092.1]] |Putative translocon protein, not a T3E |Huguet & Bonas, 1997; Meyer //et al.//, 2006  |
|HrpW |  |RipW (formerly PopW) |[[https://www.ncbi.nlm.nih.gov/protein/WP_005926112.1|WP_005926112.1]] |[[https://www.ebi.ac.uk/interpro/entry/pfam/PF03211|Pectate lyase]], perhaps not a T3E |Charkowski //et al.//, 1998; Li //et al.//, 2010  |
|XopA |Hpa1/HpaG |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011346111.1|WP_011346111.1]] |Harpin, perhaps not a T3E |Zhu //et al.//, 2000; Kim //et al.//, 2004; Sgro //et al.//, 2012; Wang //et al.//, 2018  |

===== References =====

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Gottig N, Vranych CV, Sgro GG, Piazza A, Ottado J (2018). HrpE, the major component of the //Xanthomonas// type three protein secretion pilus, elicits plant immunity responses. Sci. Rep. 8: 9842. DOI: [[https://doi.org/10.1038/s41598-018-27869-1|10.1038/s41598-018-27869-1]]

Huguet E, Bonas U (1997). HrpF of //Xanthomonas campestris// pv. //vesicatoria// encodes an 87-kDa protein with homology to NoIX of //Rhizobium fredii//. Mol. Plant Microbe Interact. 10: 488-498. DOI: [[https://doi.org/10.1094/MPMI.1997.10.4.488|10.1094/MPMI.1997.10.4.488]]

Kim JG, Jeon E, Oh J, Moon JS, Hwang I (2004). Mutational analysis of //Xanthomonas// harpin HpaG identifies a key functional region that elicits the hypersensitive response in nonhost plants. J. Bacteriol. 186: 6239-6247. DOI: [[https://doi.org/10.1128/JB.186.18.6239-6247.2004|10.1128/JB.186.18.6239-6247.2004]]

Li JG, Liu HX, Cao J, Chen LF, Gu C, Allen C, Guo JH (2010). PopW of //Ralstonia solanacearum//, a new two-domain harpin targeting the plant cell wall. Mol. Plant Pathol. 11: 371-381. DOI: [[https://doi.org/10.1111/j.1364-3703.2010.00610.x|10.1111/j.1364-3703.2010.00610.x]]

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Parker JE, Barber CE, Fan MJ, Daniels MJ (1993). Interaction of //Xanthomonas campestris// with //Arabidopsis thaliana//: characterization of a gene from //X. c.// pv. //raphani// that confers avirulence to most //A. thaliana// accessions. Mol. Plant Microbe Interact. 6: 216-224. DOI: [[https://doi.org/10.1094/mpmi-6-216|10.1094/mpmi-6-216]]

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Pesce C, Jacobs JM, Berthelot E, Perret M, Vancheva T, Bragard C, Koebnik R (2017). Comparative genomics identifies a novel conserved protein, HpaT, in proteobacterial type III secretion systems that do not possess the putative translocon protein HrpF. Front. Microbiol. 8: 1177. DOI: [[https://doi.org/10.3389/fmicb.2017.01177|10.3389/fmicb.2017.01177]]

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Sabbagh CRR, Carrere S, Lonjon F, Vailleau F, Macho AP, Genin S, Peeters N (2019). Pangenomic type III effector database of the plant pathogenic //Ralstonia// spp. PeerJ 7: e7346. DOI: [[https://doi.org/10.7717/peerj.7346|10.7717/peerj.7346]]

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