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--- diagnostics:disease_regulation_management [2025/02/17 15:35] – rkoebnik
+++ diagnostics:disease_regulation_management [2026/07/06 10:54] (current) – rkoebnik
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-====== Phytosanitary-Regulated Xanthomonas in the European Union ======
+====== Phytosanitary-Regulated Xanthomonads in the European Union ======
 This data is based on the review by [[https://doi.org/10.3390/microorganisms9040862|Catara et al. (2021)]], focused on the molecular methods for diagnosis, detection, and studies on the diversity of plant pathogenic //Xanthomonas//, concentrating especially on regulated pathogens in the European Union published as a collective effort of the [[https://euroxanth.eu/management/wg1|Working Group 1]] 'Diagnostics & Diversity–Population Structure' from the [[https://euroxanth.eu|EuroXanth]] COST Action CA16107.
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 ^  Disease  ^  Pathogen  ^  EPPO List  ^  EPPO Diagnostic \\ Protocol  ^  Commission Implementing Regulation (EU) 2019/2072  ^  EFSA \\ Documents  |
-|Citrus bacterial canker |//X. citri// pv. //aurantifolii//; //X. citri// pv. //citri//   |  A1  |[[https://doi.org/10.1111/j.1365-2338.2005.00835.x|EPPO (2015)]], [[https://doi.org/10.1111/epp.12913|EPPO (2023a)]] |  A1 Quarantine pest (Annex II A)  |[[https://doi.org/10.2903/j.efsa.2014.3556|EFSA PLH Panel (2014a)]], \\  [[https://doi.org/10.2903/sp.efsa.2019.EN-1587|EFSA PLH Panel (2019c)]] |
+|Citrus bacterial canker |//X. citri// pv. //aurantifolii//; //X. citri// pv. //citri//   |  A1  |[[https://doi.org/10.1111/j.1365-2338.2005.00835.x|EPPO (2015)]], \\  [[https://doi.org/10.1111/epp.12913|EPPO (2023a)]] |  A1 Quarantine pest (Annex II A)  |[[https://doi.org/10.2903/j.efsa.2014.3556|EFSA PLH Panel (2014a)]], \\  [[https://doi.org/10.2903/sp.efsa.2019.EN-1587|EFSA PLH Panel (2019c)]], \\  [[https://doi.org/10.2903/sp.efsa.2025.EN-9399|EFSA (2025d)]] |
 |Onion bacterial blight |//X. euvesicatoria// pv. //alli//   |  A1  |[[https://doi.org/10.1111/epp.12329|EPPO (2016)]] |  |  |
-|Bacterial leaf blight of rice |//X. oryzae// pv. //oryzae//   |  A1  |[[https://doi.org/10.1111/j.1365-2338.1980.tb02685.x|EPPO (1980)]], [[https://doi.org/10.1111/j.1365-2338.2007.01162.x|EPPO (2007)]], [[https://doi.org/10.1111/epp.12474|EPPO (2018)]] |  A1 Quarantine pest (Annex II A)  |[[https://doi.org/10.2903/j.efsa.2018.5109|EFSA PLH Panel (2018a)]] |
+|Bacterial leaf blight of rice |//X. oryzae// pv. //oryzae//   |  A1  |[[https://doi.org/10.1111/j.1365-2338.1980.tb02685.x|EPPO (1980)]], \\  [[https://doi.org/10.1111/j.1365-2338.2007.01162.x|EPPO (2007)]], \\  [[https://doi.org/10.1111/epp.12474|EPPO (2018)]] |  A1 Quarantine pest (Annex II A)  |[[https://doi.org/10.2903/j.efsa.2018.5109|EFSA PLH Panel (2018a)]] |
-|Bacterial leaf streak of rice |//X. oryzae// pv. //oryzicola//   |  A1  |[[https://doi.org/10.1111/j.1365-2338.1979.tb02445.x|EPPO (1979)]], [[https://doi.org/10.1111/j.1365-2338.2007.01162.x|EPPO (2007)]], [[https://doi.org/10.1111/epp.12474|EPPO (2018)]] |  A1 Quarantine pest (Annex II A)  |[[https://doi.org/10.2903/j.efsa.2018.5109|EFSA PLH Panel (2018a)]] |
+|Bacterial leaf streak of rice |//X. oryzae// pv. //oryzicola//   |  A1  |[[https://doi.org/10.1111/j.1365-2338.1979.tb02445.x|EPPO (1979)]], \\  [[https://doi.org/10.1111/j.1365-2338.2007.01162.x|EPPO (2007)]], \\  [[https://doi.org/10.1111/epp.12474|EPPO (2018)]] |  A1 Quarantine pest (Annex II A)  |[[https://doi.org/10.2903/j.efsa.2018.5109|EFSA PLH Panel (2018a)]] |
 |Bacterial blight of hazelnut |//X. arboricola// pv. //corylina//   |  A2  |[[https://doi.org/10.1111/j.1365-2338.2004.00716.x|EPPO (2004)]] |  RNQP (Annex IV)  |  |
 |Bacterial spot of stone fruits |//X. arboricola// pv. //pruni//   |  A2  |[[https://doi.org/10.1111/epp.12756|EPPO (2021)]] |  RNQP (Annex IV)  |[[https://doi.org/10.2903/j.efsa.2014.3857|EFSA PLH Panel (2014b)]] |
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 |Bacterial leaf streak and black chaff of small-grain cereals |//X. translucens// pv. //translucens//   |  A2  |[[https://doi.org/10.1111/j.1365-2338.1994.tb01057.x|EPPO (1994)]]* |  |  |
 |Leafspot and dieback of ornamental fig |//X. campestris// pv. //fici//   |  |  NA  |  RNQP (Annex IV)  |  |
-|Alfalfa dwarf, Citrus variegated chlorosis, coffee leaf scorch, oleander leaf scorch, olive quick decline syndrome, phony peach disease, Pierce's disease of grapes |//Xylella fastidiosa//   |  A2  |[[https://doi.org/10.1111/epp.12575|EPPO (2019)]], [[https://doi.org/10.1111/epp.12923|EPPO (2023c)]], [[https://doi.org/10.1111/epp.13060|EPPO (2024)]] |  A2 Quarantine pest (Annex II B)  |[[https://doi.org/10.2903/j.efsa.2013.3468|EFSA (2013)]], \\  [[https://doi.org/10.2903/j.efsa.2015.4061|EFSA (2015)]], \\  [[https://doi.org/10.2903/j.efsa.2015.3989|EFSA PLH Panel (2015)]], \\  [[https://doi.org/10.2903/j.efsa.2016.4450|EFSA PLH Panel (2016a)]], \\  [[https://doi.org/10.2903/j.efsa.2016.4456|EFSA PLH Panel (2016b)]], \\  [[https://doi.org/10.2903/j.efsa.2018.5357|EFSA PLH Panel (2018b)]], \\  [[https://doi.org/10.2903/sp.efsa.2019.EN-1667|EFSA (2019)]], \\  [[https://doi.org/10.2903/j.efsa.2019.5665|EFSA PLH Panel (2019a)]], \\  [[https://doi.org/10.2903/j.efsa.2019.5666|EFSA PLH Panel (2019b)]], \\  [[https://doi.org/10.2903/sp.efsa.2020.EN-1873|EFSA (2020)]], \\  [[https://doi.org/10.2903/j.efsa.2024.8898|EFSA (2024)]], \\  [[https://doi.org/10.2903/sp.efsa.2025.EN-9244|EFSA (2025)]] |
+|Alfalfa dwarf, Citrus variegated chlorosis, coffee leaf scorch, oleander leaf scorch, olive quick decline syndrome, phony peach disease, Pierce's disease of grapes |//Xylella fastidiosa//   |  A2  |[[https://doi.org/10.1111/epp.12575|EPPO (2019)]], \\  [[https://doi.org/10.1111/epp.12923|EPPO (2023c)]], \\  [[https://doi.org/10.1111/epp.13060|EPPO (2024)]] |  A2 Quarantine pest (Annex II B)  |[[https://doi.org/10.2903/j.efsa.2013.3468|EFSA (2013)]], \\  [[https://doi.org/10.2903/j.efsa.2015.4061|EFSA (2015)]], \\  [[https://doi.org/10.2903/j.efsa.2015.3989|EFSA PLH Panel (2015)]], \\  [[https://doi.org/10.2903/j.efsa.2016.4450|EFSA PLH Panel (2016a)]], \\  [[https://doi.org/10.2903/j.efsa.2016.4456|EFSA PLH Panel (2016b)]], \\  [[https://doi.org/10.2903/j.efsa.2018.5357|EFSA PLH Panel (2018b)]], \\  [[https://doi.org/10.2903/sp.efsa.2019.EN-1667|EFSA (2019)]], \\  [[https://doi.org/10.2903/j.efsa.2019.5665|EFSA PLH Panel (2019a)]], \\  [[https://doi.org/10.2903/j.efsa.2019.5666|EFSA PLH Panel (2019b)]], \\  [[https://doi.org/10.2903/sp.efsa.2020.EN-1873|EFSA (2020)]], \\  [[https://doi.org/10.2903/j.efsa.2024.8898|EFSA (2024)]], \\  [[https://doi.org/10.2903/sp.efsa.2025.EN-9244|EFSA (2025a)]], \\  [[https://doi.org/10.2903/j.efsa.2025.9241|EFSA (2025b)]], \\  [[https://doi.org/10.2903/j.efsa.2025.9563|EFSA (2025c)]], \\  [[https://doi.org/10.2903/j.efsa.2026.9840|EFSA (2026a)]], \\  [[https://doi.org/10.2903/j.efsa.2026.10147|EFSA (2026b)]] |
 NA: not applicable; * protocol under revision or revision planned. International Seed Testing Association (ISTA), International Seed Federation (ISF), United States Department of Agriculture (USDA), and National Seed Health System (NSHS). Other sources of reviewed detection methods include scientific publications of EFSA (‘Scientific Opinions’, ‘Pest Survey Cards’, etc) and other peer-reviewed scientific journals.
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 European Food Safety Authority (EFSA) (2024). Update of the //Xylella// spp. host plant database – Systematic literature search up to 31 December 2023. EFSA J. 22: e8898. DOI: [[https://doi.org/10.2903/j.efsa.2024.8898|10.2903/j.efsa.2024.8898]]
-European Food Safety Authority (EFSA) (2025). //Xylella fastidiosa// Pest Report to support the ranking of EU candidate priority pests. EFSA Support. Publ. 22: 9244E. DOI: [[https://doi.org/10.2903/sp.efsa.2025.EN-9244|10.2903/sp.efsa.2025.EN-9244]]
+European Food Safety Authority (EFSA) (2025a). //Xylella fastidiosa// Pest Report to support the ranking of EU candidate priority pests. EFSA Support. Publ. 22: 9244E. DOI: [[https://doi.org/10.2903/sp.efsa.2025.EN-9244|10.2903/sp.efsa.2025.EN-9244]]
+European Food Safety Authority (EFSA) (2025b). Update of the //Xylella// spp. host plant database - Systematic literature search up to 30 June 2024. EFSA J. 23: e9241. DOI: [[https://doi.org/10.2903/j.efsa.2025.9241|10.2903/j.efsa.2025.9241]]
+European Food Safety Authority (EFSA) (2025c). Update of the //Xylella// spp. host plant database - Systematic literature search up to 31 December 2024. EFSA J. 23: e9563. DOI: [[https://doi.org/10.2903/j.efsa.2025.9563|10.2903/j.efsa.2025.9563]]
+European Food Safety Authority (EFSA) (2025d). //Xanthomonas citri// pv. //citri// and //X. citri// pv. //aurantifolii// Pest Report to support the ranking of EU candidate priority pests. EFSA Support. Publ. 22: 9399E. DOI: [[https://doi.org/10.2903/sp.efsa.2025.EN-9399|10.2903/sp.efsa.2025.EN-9399]]
+European Food Safety Authority (EFSA) (2026a). Update of the //Xylella// spp. host plant database - Systematic literature search up to 30 June 2025. EFSA J. 24: e9840. DOI: [[https://doi.org/10.2903/j.efsa.2026.9840|10.2903/j.efsa.2026.9840]]
+European Food Safety Authority (EFSA) (2026b). Update of the //Xylella// spp. host plant database - Systematic literature search up to 31 December 2025. EFSA J. 24: e10147. DOI: [[https://doi.org/10.2903/j.efsa.2026.10147|10.2903/j.efsa.2026.10147]]
 EFSA Panel on Plant Health (2014a). Scientific Opinion on the risk to plant health of //Xanthomonas citri// pv. //citri// and //Xanthomonas citri// pv. //aurantifolii// for the EU territory. EFSA J. 12: 3556. DOI: [[https://doi.org/10.2903/j.efsa.2014.3556|10.2903/j.efsa.2014.3556]]

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