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| bacteria:t3e:xopv [2020/07/17 09:45] – rkoebnik | bacteria:t3e:xopv [2025/07/24 22:52] (current) – jfpothier | ||
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| - | ====== XopV ====== | + | ======  | 
| - | Author: Coline Sciallano\\ | + | Author:  | 
| Internal reviewer: [[https:// | Internal reviewer: [[https:// | ||
| - | Expert reviewer:  | + | Expert reviewer:  | 
| Class: XopV\\ | Class: XopV\\ | ||
| Family: XopV\\ | Family: XopV\\ | ||
| - | Prototype: XOO3803 (// | + | Prototype: XOO3803 (// | 
| - | RefSeq ID: [[https:// | + | GenBank ID: [[https:// | 
| + | RefSeq ID: [[https:// | ||
| 3D structure: Unknown | 3D structure: Unknown | ||
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| === How discovered? === | === How discovered? === | ||
| - | XopV was discovered via genome-wide screening for effector candidates in //X. oryzae// pv. //oryzae// (//Xoo//) strain MAFF 311018 in accordance with three criteria: i) ORF encoding proteins homologous to effectors of //P. syringae// strains and //X. campestris// | + | XopV was discovered via genome-wide screening for effector candidates in //X. oryzae// pv. //oryzae// (//Xoo//) strain MAFF 311018 in accordance with three criteria: i) ORF encoding proteins homologous to effectors of //P. syringae// strains and //X. campestris// | 
| === (Experimental) evidence for being a T3E === | === (Experimental) evidence for being a T3E === | ||
| - | XopV (XOO3803 in Furutani //et al//., 2009) has been shown to be translocated through the T3SS thanks to a XopV fusion with a calmodulin-dependant  | + | TT3S-dependent translocation of XopV has been shown by a calmodulin-dependent  | 
| === Regulation === | === Regulation === | ||
| - | Expression of XopV has been shown to be regulated by HrpX using a construction with //xopV// and an adenylate cyclase reporter system in hrp-inducing medium. Also, no adenylate cyclase activity and no //xopV// transcript accumulation could be detected in a //hrpX// deficient strain with the same construction  | + | //xopV// was shown to contain the PIP-box motif in their promoter region, and the expression was found to be regulated by HrpX using a beta-glucuronidase (GUS) reporter assay in //hrp//-inducing medium (Tsuge //et al.//, 2005). | 
| - | qRT-PCR revealed that transcript levels of 15 out of 18 tested non-TAL effector genes (as well as the regulatory genes //hrpG// and //hrpX//), including //xopV//, were significantly reduced in the //Xoo// Δ//xrvC// mutant compared with those in the wild-type strain PXO99< | ||
| === Phenotypes === | === Phenotypes === | ||
| - | An individual mutant for //xopV// in //Xoo //PXO99< | + | Popov //et al.// (2016) reported that // | 
| - | // | ||
| === Localization === | === Localization === | ||
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| === In xanthomonads === | === In xanthomonads === | ||
| - | Yes, examples:  | + | Yes (//e.g.//, //X. campestris//, | 
| === In other plant pathogens/ | === In other plant pathogens/ | ||
| - | Yes, examples:  | + | Yes (//e.g.//, // | 
| ===== References ===== | ===== References ===== | ||
| - | Deb S, Ghosh P, Patel HK, Sonti RV (2020). Interaction of the // | + | Deb S, Ghosh P, Patel HK, Sonti RV (2020). Interaction of the // | 
| Furutani A, Takaoka M, Sanada H, Noguchi Y, Oku T, Tsuno K, Tsuge S (2009). Identification of novel type III secretion effectors in // | Furutani A, Takaoka M, Sanada H, Noguchi Y, Oku T, Tsuno K, Tsuge S (2009). Identification of novel type III secretion effectors in // | ||
| - | |||
| - | Liu Y, Long J, Shen D, Song C (2016). // | ||
| Long J, Song C, Yan F, Zhou J, Zhou H, Yang B (2018). Non-TAL effectors from // | Long J, Song C, Yan F, Zhou J, Zhou H, Yang B (2018). Non-TAL effectors from // | ||
| + | |||
| + | Popov G, Fraiture M, Brunner B, Sessa G (2016). Multiple // | ||
| Song C, Yang B (2010). Mutagenesis of 18 type III effectors reveals virulence function of XopZ< | Song C, Yang B (2010). Mutagenesis of 18 type III effectors reveals virulence function of XopZ< | ||
| + | |||
| + | Tsuge S, Terashima S, Furutani A, Ochiai H, Oku T, Tsuno K, Kaku H, Kubo Y (2005). Effects on promoter activity of base substitutions in the // | ||
| + | |||
| + | ===== Acknowledgements ===== | ||
| + | |||
| + | This fact sheet is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology). | ||