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bacteria:t3e:xopt [2023/01/09 10:20] – external edit 127.0.0.1bacteria:t3e:xopt [2025/07/04 23:46] (current) – jfpothier
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-====== XopT ======+====== The Type III Effector XopT from //Xanthomonas// ======
  
-Author: John Doe\\ +Author: [[https://www.researchgate.net/profile/Ralf_Koebnik|Ralf Koebnik]]\\
-Reviewer: Jane Doe+
  
 Class: XopT\\ Class: XopT\\
 Family: XopT\\ Family: XopT\\
-Prototype: Xop? (//Xanthomonas//; strain)\\ +Prototype: XOO2210 (//Xanthomonas oryzae// pv. //oryzae//; strain T7174)\\ 
-RefSeq ID:\\+GenBank ID: [[https://www.ncbi.nlm.nih.gov/protein/BAE68965.1|BAE68965.1]] (293 aa)\\ 
 +RefSeq ID: [[https://www.ncbi.nlm.nih.gov/protein/WP_199285673.1|WP_199285673.1]] (344 aa)\\
 3D structure: Unknown 3D structure: Unknown
  
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 === How discovered? === === How discovered? ===
  
 +XopT was discovered via genome-wide screening for effector candidates in //X. oryzae// pv. //oryzae// (//Xoo//) strain MAFF 311018 in accordance with three criteria: i) ORF encoding proteins homologous to effectors of //P. syringae// strains and //X. campestris// pv. //vesicatoria//, ii) HrpX regulons preceded by two cis elements (Plant Induced Promoter, PIP; and -10 box-like motif) or iii) proteins with an N-terminal amino acid composition similar to known effectors (more than 10% of Ser in the first 50 amino aa, no Asp or Glu residues in the first 12 aa, and an aliphatic amino acid or Pro at the third or fourth position) (Furutani //et al//., 2009).
 === (Experimental) evidence for being a T3E === === (Experimental) evidence for being a T3E ===
 +
 +TT3S-dependent translocation of XopT has been shown by a calmodulin-dependent adenylate cyclase reporter assay (Furutani //et al//., 2009).
  
 === Regulation === === Regulation ===
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 Furutani A, Takaoka M, Sanada H, Noguchi Y, Oku T, Tsuno K, Ochiai H, Tsuge S (2009). Identification of novel type III secretion effectors in //Xanthomonas oryzae// pv. //oryzae//. Mol. Plant Microbe Interact. 22: 96-106. DOI: [[https://doi.org/10.1094/MPMI-22-1-0096|10.1094/MPMI-22-1-0096]] Furutani A, Takaoka M, Sanada H, Noguchi Y, Oku T, Tsuno K, Ochiai H, Tsuge S (2009). Identification of novel type III secretion effectors in //Xanthomonas oryzae// pv. //oryzae//. Mol. Plant Microbe Interact. 22: 96-106. DOI: [[https://doi.org/10.1094/MPMI-22-1-0096|10.1094/MPMI-22-1-0096]]
 +
 +===== Acknowledgements =====
 +
 +This fact sheet is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology).
  
bacteria/t3e/xopt.1673259603.txt.gz · Last modified: 2023/01/09 10:20 by 127.0.0.1

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