User Tools

Site Tools


bacteria:t3e:xopm

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
Next revision
Previous revision
bacteria:t3e:xopm [2024/12/17 11:10] fboernkebacteria:t3e:xopm [2025/02/13 12:37] (current) jfpothier
Line 2: Line 2:
  
 Author: [[https://www.researchgate.net/profile/Ralf_Koebnik|Ralf Koebnik]]\\ Author: [[https://www.researchgate.net/profile/Ralf_Koebnik|Ralf Koebnik]]\\
-Expert reviewer: **Contacted: Frederik Börnke**+Expert reviewer: [[https://www.researchgate.net/profile/Frederik-Boernke|Frederik Börnke]]
  
 Class: XopM\\ Class: XopM\\
Line 14: Line 14:
 === How discovered? === === How discovered? ===
  
-//xopM// <sub>//Xee//85-10</sub> was identified as a candidate T3E gene based on the presence of a PIP box in the promoter region and its conservation in other plant pathogens (Schulze //et al.//, 2012). +//xopM// <sub>//Xee//85-10</sub> was identified as a candidate T3E gene based on the presence of a PIP box in the promoter region and its conservation in other plant pathogens (Schulze //et al.//, 2012). XopM was also discovered as a T3E in //Xee//<sub>85-10</sub> using a machine-learning approach (Teper //et al//., 2016). 
- <font 14px font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; background-color: rgb(255, 255, 255); text-decoration: none; display: inline !important; float: none;/Arial, sans-serif;;inherit;;rgb(51, 51, 51) color: rgb(51, 51, 51); font-family: Arial, sans-serif; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; background-color: rgb(255, 255, 255); text-decoration: none; display: inline !important; float: none;>XopM was also discovered as a T3E in</font>  //Xe////e// +
- <font 14px font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; background-color: rgb(255, 255, 255); text-decoration: none; display: inline !important; float: none;/Arial, sans-serif;;inherit;;rgb(51, 51, 51) color: rgb(51, 51, 51); font-family: Arial, sans-serif; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; background-color: rgb(255, 255, 255); text-decoration: none; display: inline !important; float: none;><sub>85-10</sub> using a machine-learning approach (Teper</font>  //et al// +
- <font 14px font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; background-color: rgb(255, 255, 255); text-decoration: none; display: inline !important; float: none;/Arial, sans-serif;;inherit;;rgb(51, 51, 51) color: rgb(51, 51, 51); font-family: Arial, sans-serif; font-size: 14px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; background-color: rgb(255, 255, 255); text-decoration: none; display: inline !important; float: none;>., 2016).</font>+
 === (Experimental) evidence for being a T3E === === (Experimental) evidence for being a T3E ===
  
Line 23: Line 21:
  
 To test for T3SS-dependent translocation into plant cells, //Xee// <sub>85-10</sub> expressing the XopM-AvrBs3 chimeric protein was inoculated into leaves of AvrBs3-responsive pepper plants (ECW-30R) and the near-isogenic susceptible pepper line ECW, which lacks the //Bs3// resistance gene. Bacteria expressing the XopM<sub>1–520</sub>-AvrBs3delta2 chimeric protein induced the hypersensitive response (HR) in ECW-30R, but not in ECW. As expected, no HR induction was observed in plants infected with a strain mutated in the T3SS gene //hrcV// (Schulze //et al.//, 2012). To test for T3SS-dependent translocation into plant cells, //Xee// <sub>85-10</sub> expressing the XopM-AvrBs3 chimeric protein was inoculated into leaves of AvrBs3-responsive pepper plants (ECW-30R) and the near-isogenic susceptible pepper line ECW, which lacks the //Bs3// resistance gene. Bacteria expressing the XopM<sub>1–520</sub>-AvrBs3delta2 chimeric protein induced the hypersensitive response (HR) in ECW-30R, but not in ECW. As expected, no HR induction was observed in plants infected with a strain mutated in the T3SS gene //hrcV// (Schulze //et al.//, 2012).
 +
 === Regulation === === Regulation ===
  
 Expression of //xopM// <sub>//Xee//85-10</sub> was shown to be controlled by both HrpG and HrpX (Schulze //et al.//, 2012). Expression of //xopM// <sub>//Xee//85-10</sub> was shown to be controlled by both HrpG and HrpX (Schulze //et al.//, 2012).
 +
 === Phenotypes === === Phenotypes ===
  
-The //Xee// <sub>85-10</sub> strain deleted in //xopM// showed no difference in the induction of disease symptoms on pepper plants compared to the wild-type strain 85-10 (Schulze //et al.//, 2012).+The //Xee//<sub>85-10</sub> strain deleted in //xopM// showed no difference in the induction of disease symptoms on pepper plants compared to the wild-type strain 85-10 (Schulze //et al.//, 2012). 
 + 
 +To identify defense reactions, mediated by //xopM//, leaves of pepper ECW, //Nicotiana benthamiana// and //N. tabacum//, the latter two being nonhost plants of //Xee// <sub>85-10</sub>, were inoculated with //Agrobacterium// strains mediating the //in planta// expression of the effector gene fused to GFP. In this assay, XopM elicited a cell death reaction in //N. benthamiana// at 3–5 dpi (Schulze //et al.//, 2012). 
 +When ectopically expressed in plants, XopM supports growth of a non-pathogenic bacterial strain and dampens the production of reactive oxygen species, indicating its ability to suppress plant immunity (Brinkmann et al., 2024). The abilty to repress a flg22 induced ROS burst is independent of XopM binding to VAP but requires localization at the host cell plasma membrane (see below, Brinkmann et al., 2024).
  
-To identify defense reactions, mediated by //xopM//, leaves of pepper ECW, //Nicotiana benthamiana// and //N. tabacum//, the latter two being nonhost plants of //Xee// <sub>85-10</sub>, were inoculated with //Agrobacterium// strains mediating the //in planta //expression of the effector gene fused to GFP. In this assay, XopM elicited a cell death reaction in //N. benthamiana// at 3–5 dpi (Schulze //et al.//, 2012). 
 === Localization === === Localization ===
  
-XopM-GFP fusions have been shown to localize to the plant plasma membrane (PM) in //N. benthamiana //leaf epidermal cells. Possibly concentrated in ER-PM contact sites (Brinkmann et al., 2024)+XopM-GFP fusions have been shown to localize to the plant plasma membrane (PM) in //N. benthamiana// leaf epidermal cells. Possibly concentrated in ER-PM contact sites (Brinkmann //et al//., 2024)
 === Enzymatic function === === Enzymatic function ===
  
Line 40: Line 42:
 === Interaction partners === === Interaction partners ===
  
- XopM interacts with vesicle-associated membrane protein (VAMP)-associated proteins (VAPs) in an isoform specific manner. XopM displays two FFAT [two phenylalanines (FF) in an acidic tract (AT)] motifs that cooperatively mediate the interaction with VAP. Binding to VAP is not required for XopM's ability to suppress PTI, indicating that it has other virulence targets. In planta pull-down assays using XopM-GFP as a bait, suggest that it interacts with additional membrane components (Brinkmann et al., 2024).+XopM interacts with vesicle-associated membrane protein (VAMP)-associated proteins (VAPs) in an isoform specific manner. XopM displays two FFAT [two phenylalanines (FF) in an acidic tract (AT)] motifs that cooperatively mediate the interaction with VAP. Binding to VAP is not required for XopM's ability to suppress PTI, indicating that it has other virulence targets. //In planta// pull-down assays using XopM-GFP as a bait, suggest that it interacts with additional membrane components (Brinkmann //et al//., 2024).
  
 ===== Conservation ===== ===== Conservation =====
bacteria/t3e/xopm.1734433814.txt.gz · Last modified: 2024/12/17 11:10 by fboernke