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| bacteria:t3e:xopk [2025/07/04 23:40] – jfpothier | bacteria:t3e:xopk [2025/07/24 22:40] (current) – jfpothier | ||
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| Preceded by both a PIP box and a -10 box-like motif (Schulze //et al//., 2012; Furutani //et al//., 2006). | Preceded by both a PIP box and a -10 box-like motif (Schulze //et al//., 2012; Furutani //et al//., 2006). | ||
| - | qRT-PCR revealed that transcript levels of 15 out of 18 tested non-TAL effector genes (as well as the regulatory genes //hrpG// and //hrpX//), including //xopK//, were significantly reduced in the // | + | qRT-PCR revealed that transcript levels of 15 out of 18 tested non-TAL effector genes (as well as the regulatory genes //hrpG// and //hrpX//), including //xopK//, were significantly reduced in the // | 
| === Phenotypes === | === Phenotypes === | ||
| - |   * Deletion of XopK has been shown not to affect the virulence of //X. oryzae//  | + |   * Deletion of XopK has been shown not to affect the virulence of //X. oryzae// pv. //oryzae// (//Xoo//) PXO99< | 
| - |   * A ∆// | + |   * A ∆//xopK// mutant strain of // | 
| - |   * XopK< | + |   * XopK< | 
| - |   * Transgenic strawberries expressing XopK exhibit increased susceptibility to // | + |   * Transgenic strawberries expressing XopK exhibit increased susceptibility to // | 
| === Localization === | === Localization === | ||
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| === Enzymatic function === | === Enzymatic function === | ||
| - | The protein has E3 ubiquinol ligase activity. The putative E2-binding site is highly conserved in the majority of members from different // | + | The protein has E3 ubiquinol ligase activity. The putative E2-binding site is highly conserved in the majority of members from different // | 
| === Interaction partners === | === Interaction partners === | ||
| - | XopK< | + | XopK< | 
| ===== Conservation ===== | ===== Conservation ===== | ||