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bacteria:t3e:xopj4 [2020/07/20 09:14] – [References] daivaburo_yahoo.com | bacteria:t3e:xopj4 [2025/02/13 11:48] (current) – jfpothier | ||
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- | ====== XopJ4 ====== | + | ====== |
Author: [[https:// | Author: [[https:// | ||
- | Internal reviewer: [[https:// | + | Internal reviewer: [[https:// |
- | Expert reviewer: FIXME | + | |
Class: XopJ\\ | Class: XopJ\\ | ||
Family: XopJ4\\ | Family: XopJ4\\ | ||
Prototype: AvrXv4 (// | Prototype: AvrXv4 (// | ||
+ | GenBank ID: [[https:// | ||
RefSeq ID: [[https:// | RefSeq ID: [[https:// | ||
Synonym: AvrXv4\\ | Synonym: AvrXv4\\ | ||
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To ascertain if //X. campestris// | To ascertain if //X. campestris// | ||
- | The immune pathway reasponsible for the perception of the // | + | The immune pathway reasponsible for the perception of the // |
=== Regulation === | === Regulation === | ||
- | Presence of a PIP box (TTCGC-N15-TTCGC) (Astua-Monge //et al//., 2000). | + | Presence of a PIP box (TTCGC-N< |
=== Phenotypes === | === Phenotypes === | ||
- | AvrXv4 is an avirulence protein in //X. campestris //pv. // | + | AvrXv4 is an avirulence protein in //X. campestris// |
- | //N. benthamiana //ethyl methanesulfonate (EMS) mutants deficient for XopJ4 perception were idetified as having loss of function mutations in the gene encoding the nucleotide binding, leucine rich repeat (NLR) protein NbZAR1. Silecing of a recertor-like cytoplasmic kinase family XII gene, subsequently named XOPJ4 IMMUNITY 2 (JIM2), blocks perception of XopJ4 (Schultink //et al., //2019). | + | //N. benthamiana// |
**Localization** | **Localization** | ||
AvrXv4 is localized to the plant cytoplasm (Roden //et al//., 2004). | AvrXv4 is localized to the plant cytoplasm (Roden //et al//., 2004). | ||
- | + | The //xopJ4// gene was located between phage associated genes (Timilsina //et al//., 2019). | |
- | <font 10.5pt/ | + | |
=== Enzymatic function === | === Enzymatic function === | ||
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**In xanthomonads** | **In xanthomonads** | ||
- | + | Yes (// | |
- | <font 10.5pt/ | + | |
**In other plant pathogens/ | **In other plant pathogens/ | ||
- | + | Yes (// | |
- | <font 10.5pt/ | + | The predicted AvrXv4 protein exhibits high similarity to members of family of bacterial proteins comprising AvrRxv, AvrBsT, AvrA, YL4O (Astua-Monge //et al//., 2000). |
- | + | ||
- | <font 10.5pt/ | + | |
===== References ===== | ===== References ===== | ||
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Roden J, Eardley L, Hotson A, Cao Y, Mudgett MB (2004). Characterization of the // | Roden J, Eardley L, Hotson A, Cao Y, Mudgett MB (2004). Characterization of the // | ||
- | <font 10.5pt/ | + | Sharlach M, Dahlbeck D, Liu L, Chiu J, Jiménez-Gómez JM, Kimura S, Koenig D, Maloof JN, Sinha N, Minsavage GV, Jones JB, Stall RE, Staskawicz BJ (2013). Fine genetic mapping of //RXopJ4//, a bacterial spot disease resistance locus from //Solanum pennellii// LA716. Theor. Appl. Genet. 126: 601-609. DOI: [[https:// |
- | Schultink A, Qi T, Bally J, Staskawicz B (2019). Using forward genetics in //Nicotiana benthamiana //to uncover the immune signaling pathway mediating recognition of the // | + | Schultink A, Qi T, Bally J, Staskawicz B (2019). Using forward genetics in //Nicotiana benthamiana //to uncover the immune signaling pathway mediating recognition of the // |
Timilsina S, Abrahamian P, Potnis N, Minsavage GV, White FF, Staskawicz BJ, Jones JB, Vallad GE, Goss EM (2016). Analysis of sequenced genomes of // | Timilsina S, Abrahamian P, Potnis N, Minsavage GV, White FF, Staskawicz BJ, Jones JB, Vallad GE, Goss EM (2016). Analysis of sequenced genomes of // | ||
Timilsina S, Pereira-Martin JA, Minsavage GV, Iruegas-Bocardo F, Abrahamian, Potnis N, Kolaczkowski B, Vallad GE, Goss EM, Jones JB (2019). Multiple recombination events drive the current genetic structure of // | Timilsina S, Pereira-Martin JA, Minsavage GV, Iruegas-Bocardo F, Abrahamian, Potnis N, Kolaczkowski B, Vallad GE, Goss EM, Jones JB (2019). Multiple recombination events drive the current genetic structure of // | ||
+ | |||
+ | ===== Acknowledgements ===== | ||
+ | |||
+ | This fact sheet is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology). | ||