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bacteria:t3e:xopj4 [2020/07/09 13:23] – [Biological function] daivaburo_yahoo.com | bacteria:t3e:xopj4 [2025/02/13 11:48] (current) – jfpothier | ||
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- | ====== XopJ4 ====== | + | ====== |
- | + | ||
- | Author: [[https:// | + | |
+ | Author: [[https:// | ||
Internal reviewer: [[https:// | Internal reviewer: [[https:// | ||
- | Expert reviewer: FIXME | + | Class: XopJ\\ |
- | + | Family: XopJ4\\ | |
- | Class: XopJ | + | Prototype: AvrXv4 (// |
- | + | GenBank ID: [[https:// | |
- | Family: XopJ4 | + | |
- | + | ||
- | Prototype: AvrXv4 (// | + | |
RefSeq ID: [[https:// | RefSeq ID: [[https:// | ||
Synonym: AvrXv4\\ | Synonym: AvrXv4\\ | ||
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To ascertain if //X. campestris// | To ascertain if //X. campestris// | ||
+ | |||
+ | The immune pathway reasponsible for the perception of the // | ||
=== Regulation === | === Regulation === | ||
- | Presence of a PIP box (TTCGC-N15-TTCGC) (Astua-Monge //et al//., 2000). | + | Presence of a PIP box (TTCGC-N< |
=== Phenotypes === | === Phenotypes === | ||
- | AvrXv4 is an avirulence protein in //X. campestris //pv. // | + | AvrXv4 is an avirulence protein in //X. campestris// |
+ | |||
+ | //N. benthamiana// | ||
**Localization** | **Localization** | ||
AvrXv4 is localized to the plant cytoplasm (Roden //et al//., 2004). | AvrXv4 is localized to the plant cytoplasm (Roden //et al//., 2004). | ||
- | + | The //xopJ4// gene was located between phage associated genes (Timilsina //et al//., 2019). | |
- | <font 10.5pt/ | + | |
=== Enzymatic function === | === Enzymatic function === | ||
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**In xanthomonads** | **In xanthomonads** | ||
- | + | Yes (// | |
- | <font 10.5pt/ | + | |
**In other plant pathogens/ | **In other plant pathogens/ | ||
- | + | Yes (// | |
- | <font 10.5pt/ | + | The predicted AvrXv4 protein exhibits high similarity to members of family of bacterial proteins comprising AvrRxv, AvrBsT, AvrA, YL4O (Astua-Monge //et al//., 2000). |
- | + | ||
- | <font 10.5pt/ | + | |
===== References ===== | ===== References ===== | ||
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Lavie M, Shillington E, Eguiluz C, Grimsley N, Boucher C (2002). PopP1, a new member of the YopJ/AvrRxv family of type III effector proteins, acts as a host-specificity factor and modulates aggressiveness of //Ralstonia solanacearum// | Lavie M, Shillington E, Eguiluz C, Grimsley N, Boucher C (2002). PopP1, a new member of the YopJ/AvrRxv family of type III effector proteins, acts as a host-specificity factor and modulates aggressiveness of //Ralstonia solanacearum// | ||
- | Roden J, Eardley L, Hotson A, Cao Y, Mudgett, MB (2004). Characterization of the // | + | Roden J, Eardley L, Hotson A, Cao Y, Mudgett MB (2004). Characterization of the // |
- | <font 10.5pt/ | + | Sharlach M, Dahlbeck D, Liu L, Chiu J, Jiménez-Gómez JM, Kimura S, Koenig D, Maloof JN, Sinha N, Minsavage GV, Jones JB, Stall RE, Staskawicz BJ (2013). Fine genetic mapping of //RXopJ4//, a bacterial spot disease resistance locus from //Solanum pennellii// LA716. Theor. Appl. Genet. 126: 601-609. DOI: [[https:// |
+ | |||
+ | Schultink A, Qi T, Bally J, Staskawicz B (2019). Using forward genetics in //Nicotiana benthamiana //to uncover the immune signaling pathway mediating recognition of the // | ||
Timilsina S, Abrahamian P, Potnis N, Minsavage GV, White FF, Staskawicz BJ, Jones JB, Vallad GE, Goss EM (2016). Analysis of sequenced genomes of // | Timilsina S, Abrahamian P, Potnis N, Minsavage GV, White FF, Staskawicz BJ, Jones JB, Vallad GE, Goss EM (2016). Analysis of sequenced genomes of // | ||
- | <font 10.5pt/ | + | Timilsina S, Pereira-Martin JA, Minsavage GV, Iruegas-Bocardo F, Abrahamian, Potnis N, Kolaczkowski B, Vallad GE, Goss EM, Jones JB (2019). Multiple recombination events drive the current genetic structure of // |
+ | |||
+ | ===== Acknowledgements ===== | ||
+ | This fact sheet is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology). | ||