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--- bacteria:t3e:xopj4 [2020/07/09 12:19] – [Biological function] daivaburo_yahoo.com
+++ bacteria:t3e:xopj4 [2025/07/24 22:36] (current) – jfpothier
@@ Line 1: / Line 1: @@
-====== XopJ4 ======
+====== The Type III Effector XopJ4 from //Xanthomonas// ======
 Author: [[https://www.researchgate.net/profile/Katarina_Gasic|Katarina Gašić]]\\
-Internal reviewer: FIXME \\
+Internal reviewer: [[https://www.researchgate.net/profile/Daiva_Burokiene|Daiva Burokienė]]\\
-Expert reviewer: FIXME
 Class: XopJ\\
 Family: XopJ4\\
-Prototype: AvrXv4 (//Xanthomonas euvesicatoria// pv. //perforans//, ex //Xanthomonas campestris// pv. //vesicatoria//; race T3strain 91-118)\\
+Prototype: AvrXv4 (//Xanthomonas euvesicatoria// pv. //perforans//, ex //Xanthomonas campestris// pv. //vesicatoria//; race T3 strain 91-118)\\
+GenBank ID: [[https://www.ncbi.nlm.nih.gov/protein/AAG39033.1|AAG39033.1]] (359 aa)\\
 RefSeq ID: [[https://www.ncbi.nlm.nih.gov/protein/WP_008572727.1|WP_008572727.1]] (359 aa)\\
 Synonym: AvrXv4\\
@@ Line 14: / Line 14: @@
 ===== Biological function =====
-=== How discovered? ===
+**How discovered?**
- An avirulence gene named avrXv4 was isolated by mobilizing a total of 600 clones from a genomic DNA library of the T3 strain 91-118 into the  CKGE_TMP_i X. campestris CKGE_TMP_i  pv.  CKGE_TMP_i vesicatoria CKGE_TMP_i  strain ME90, virulent on  CKGE_TMP_i L. pennellii CKGE_TMP_i . One cosmid clone, pXcvT3-60 (29-kb insert), induced HR in resistant plants. The avirulent phenotype of pXcvT3-60 was confirmed by comparing growth rates  CKGE_TMP_i in planta CKGE_TMP_i  and electrolyte leakages among transconjugants carrying a mutated or intact clone with the wild-type T3 strain 91-118. A 1.9-kb DNA fragment contained within a 6.8-kb active subclone was sequenced and was determined to carry an open reading frame of 1,077 bp (Astua-Monge  CKGE_TMP_i et al. CKGE_TMP_i , 2000).
+An avirulence gene named avrXv4 was isolated by mobilizing a total of 600 clones from a genomic DNA library of the T3 strain 91-118 into the //X. campestris// pv. //vesicatoria// strain ME90, virulent on //L. pennellii//. One cosmid clone, pXcvT3-60 (29-kb insert), induced HR in resistant plants. The avirulent phenotype of pXcvT3-60 was confirmed by comparing growth rates //in planta// and electrolyte leakages among transconjugants carrying a mutated or intact clone with the wild-type T3 strain 91-118. A 1.9-kb DNA fragment contained within a 6.8-kb active subclone was sequenced and was determined to carry an open reading frame of 1,077 bp (Astua-Monge //et al.//, 2000).
 === (Experimental) evidence for being a T3E ===
 To ascertain if //X. campestris// pv. //vesicatoria// (//Xcv//) translocates AvrXv4 via the hrp-encoded TTSS into plant cells during infection, the calmodulin-dependent adenylate cyclase domain (Cya) of //Bordetella pertussis// cyclolysin as a sensitive reporter protein was employed. It was constructed a translational C-terminal fusion of the Cya reporter to the mature AvrXv4 protein (359 amino acids [aa]) (AvrXv4-Cya) and to the first 100 aa residues of AvrXv4 (AvrXv4<sub>1-100</sub>-Cya). Cya enzymatic activity requires eukaryotic calmodulin for the production of cAMP. Therefore, the Cya reporter protein produced in the bacterium must be translocated into the eukaryotic cell to be activated (Roden //et al//., 2004). Results of experiments showed that //Xcv// secretes AvrXv4 via the Hrp TTSS and translocates it directly through the cell wall into the interior of the plant cell. Furthermore, the N-terminal 100 aa of AvrXv4 are sufficient to target the type III-dependent secretion and translocation of the Cya reporter to plant cells (Roden //et al//., 2004).
+The immune pathway reasponsible for the perception of the //Xanthomonas perforans// effector XopJ4 wa sidentified in the plant //Nicotiana benthamiana//. Transient complemmentation assays were performed to determine the functionality of //xopJ4// gene variants and coimmunoprecipitation assays were used to gain insight into molecular mechanism of the pathway (Schultink //et al.//, 2019).
 === Regulation ===
-Presence of a PIP box (TTCGC-N15-TTCGC) (Astua-Monge //et al//., 2000).
+Presence of a PIP box (TTCGC-N<sub>15</sub>-TTCGC) (Astua-Monge //et al//., 2000).
 === Phenotypes ===
-AvrXv4 is an avirulence protein in //Xcv// strain 91-118 that induces an //XV4//-dependent HR in the wild tomato relative //Lycopersicon pennellii// ( Astua-Monge  CKGE_TMP_i et al., CKGE_TMP_i  2000; Roden  CKGE_TMP_i et al CKGE_TMP_i ., 2004; Sharlach  CKGE_TMP_i et al. CKGE_TMP_i  2013   ). AvrXv4-dependent HR also is elicited in //Nicotiana benthamiana// plants when they are infected with //Xanthomonas// strains expressing untagged AvrXv4 and HA-tagged AvrXv4-HA (Roden //et al//., 2004). AvrXv4 recognition by resistant plants requires a functional protease catalytic core, the domain that is conserved in all of the putative YopJ-like cysteine proteases. AvrXv4 expression in planta leads to a reduction in SUMO-modified proteins, demonstrating that AvrXv4 possesses SUMO isopeptidase activity. YopJ-like effector AvrXv4 encodes a type III SUMO protease effector that is active in the cytoplasmic compartment of plant cells (Roden //et al//., 2004).
+AvrXv4 is an avirulence protein in //X. campestris// pv. //vesicatoria// strain 91-118 that induces an //XV//-dependent HR in the wild tomato relative //Lycopersicon pennellii// (Astua-Monge //et al//., 2000; Roden //et al//., 2004; Sharlach //et al//., 2013). AvrXv4-dependent HR also is elicited in //Nicotiana benthamiana// plants when they are infected with //Xanthomonas// strains expressing untagged AvrXv4 and HA-tagged AvrXv4-HA (Roden //et al//., 2004). AvrXv4 recognition by resistant plants requires a functional protease catalytic core, the domain that is conserved in all of the putative YopJ-like cysteine proteases. AvrXv4 expression in planta leads to a reduction in SUMO-modified proteins, demonstrating that AvrXv4 possesses SUMO isopeptidase activity. YopJ-like effector AvrXv4 encodes a type III SUMO protease effector that is active in the cytoplasmic compartment of plant cells (Roden //et al//., 2004).
-=== Localization ===
+//N. benthamiana// ethyl methanesulfonate (EMS) mutants deficient for XopJ4 perception were idetified as having loss of function mutations in the gene encoding the nucleotide binding, leucine rich repeat (NLR) protein NbZAR1. Silecing of a recertor-like cytoplasmic kinase family XII gene, subsequently named XOPJ4 IMMUNITY 2 (JIM2), blocks perception of XopJ4 (Schultink //et al//., 2019).
+**Localization**
 AvrXv4 is localized to the plant cytoplasm (Roden //et al//., 2004).
+The //xopJ4// gene was located between phage associated genes (Timilsina //et al//., 2019).
 === Enzymatic function ===
 Because //in planta// expression of AvrXv4 from //X. campestris// pv. //vesicatoria// leads to a reduction of SUMO-conjugated plant proteins, AvrXv4 presumably acts as a SUMO protease on yet unknown plant target proteins (Roden //et al//., 2004).
 === Interaction partners ===
 ===== Conservation =====
-=== In xanthomonads ===
+**In xanthomonads**
 Yes (//Xanthomonas perforans//) (Astua-Monge //et al//., 2000; Roden //et al//., 2004; Timilsina //et al//., 2016).
-=== In other plant pathogens/symbionts ===
+**In other plant pathogens/symbionts**
 Yes (//Ralstonia solanacearum//) (Lavie //et al//., 2002).
+The predicted AvrXv4 protein exhibits high similarity to members of family of bacterial proteins comprising AvrRxv, AvrBsT, AvrA, YL4O (Astua-Monge //et al//., 2000).
 ===== References =====
@@ Line 49: / Line 60: @@
 Lavie M, Shillington E, Eguiluz C, Grimsley N, Boucher C (2002). PopP1, a new member of the YopJ/AvrRxv family of type III effector proteins, acts as a host-specificity factor and modulates aggressiveness of //Ralstonia solanacearum//. Mol. Plant Microbe Interact. 15: 1058-1068. DOI: [[https://doi.org/10.1094/MPMI.2002.15.10.1058|10.1094/MPMI.2002.15.10.1058]]
-Roden J, Eardley L, Hotson A, Cao Y, Mudgett, MB (2004). Characterization of the Xanthomonas AvrXv4 effector, a SUMO protease translocated into plant cells. Mol. Plant Microbe. Interact. 17: 633-643. DOI: [[https://doi.org/10.1094/MPMI.2004.17.6.633|10.1094/MPMI.2004.17.6.633]]
+Roden J, Eardley L, Hotson A, Cao Y, Mudgett MB (2004). Characterization of the //Xanthomonas// AvrXv4 effector, a SUMO protease translocated into plant cells. Mol. Plant Microbe. Interact. 17: 633-643. DOI: [[https://doi.org/10.1094/MPMI.2004.17.6.633|10.1094/MPMI.2004.17.6.633]]
+Sharlach M, Dahlbeck D, Liu L, Chiu J, Jiménez-Gómez JM, Kimura S, Koenig D, Maloof JN, Sinha N, Minsavage GV, Jones JB, Stall RE, Staskawicz BJ (2013). Fine genetic mapping of //RXopJ4//, a bacterial spot disease resistance locus from //Solanum pennellii// LA716. Theor. Appl. Genet. 126: 601-609. DOI: [[https://doi.org/10.1007/s00122-012-2004-6|10.1007/s00122-012-2004-6]]
+Schultink A, Qi T, Bally J, Staskawicz B (2019). Using forward genetics in //Nicotiana benthamiana// to uncover the immune signaling pathway mediating recognition of the //Xanthomonas perforans// effector XopJ4. New Phytol. 221: 1001-1009. DOI: [[https://doi.org/10.1111/nph.15411|10.1111/nph.15411]]
 Timilsina S, Abrahamian P, Potnis N, Minsavage GV, White FF, Staskawicz BJ, Jones JB, Vallad GE, Goss EM (2016). Analysis of sequenced genomes of //Xanthomonas perforans// identifies candidate targets for resistance breeding in tomato. Phytopathology 106: 1097-1104. DOI: [[https://doi.org/10.1094/PHYTO-03-16-0119-FI|10.1094/PHYTO-03-16-0119-FI]]
+Timilsina S, Pereira-Martin JA, Minsavage GV, Iruegas-Bocardo F, Abrahamian, Potnis N, Kolaczkowski B, Vallad GE, Goss EM, Jones JB (2019). Multiple recombination events drive the current genetic structure of //Xanthomonas perforans// in Florida. Front Microbiol. 10: 448. DOI: [[https://doi.org/10.3389/fmicb.2019.00448|10.3389/fmicb.2019.00448]]
+===== Acknowledgements =====
+This fact sheet is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology).

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