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bacteria:t3e:xopj1 [2020/06/30 16:45] – [Biological function] rkoebnik | bacteria:t3e:xopj1 [2025/02/13 11:38] (current) – jfpothier | ||
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- | ====== XopJ1 ====== | + | ====== |
- | Author: Jens Boch\\ | + | Author: |
- | Internal reviewer: Joana Costa\\ | + | Internal reviewer: |
- | Expert reviewer: | + | Expert reviewer: |
Class: XopJ\\ | Class: XopJ\\ | ||
Family: XopJ1\\ | Family: XopJ1\\ | ||
- | Prototype: | + | Prototype: |
- | RefSeq | + | GenBank |
+ | RefSeq ID: [[https:// | ||
3D structure: Unknown | 3D structure: Unknown | ||
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=== How discovered? === | === How discovered? === | ||
- | XopJ was initially discovered as a HrpG-induced gene in a cDNA-AFLP screen in // | + | XopJ was initially discovered as a HrpG-induced gene in a cDNA-AFLP screen in // |
=== (Experimental) evidence for being a T3E === | === (Experimental) evidence for being a T3E === | ||
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=== Phenotypes === | === Phenotypes === | ||
- | Although a frameshift mutation of //xopJ// did not affect pathogenicity or bacterial growth in plants in early experiments (Noël //et al//., 2003), later studies showed that a //xopJ// mutant is slightly impaired in growth in pepper in late stages of the infection (Üstun //et al//., 2013). XopJ also suppresses | + | Although a frameshift mutation of //xopJ// did not affect pathogenicity or bacterial growth in plants in early experiments (Noël //et al//., 2003), later studies showed that a //xopJ// mutant is slightly impaired in growth in pepper in late stages of the infection (Üstun //et al//., 2013). XopJ also suppresses |
=== Localization === | === Localization === | ||
- | Following type III translocation, | + | XopJ carries a predicted N-myristoylation motif on a glycine residue at position two of the polypeptide. |
=== Enzymatic function === | === Enzymatic function === | ||
- | XopJ belongs to the group of YopJ-family effectors and is a member of the YopJ/AvrRxv family of SUMO peptidases and acetyltransferases. These are characterized as C55 cysteine proteases, ubiquitin-like proteases (deSUMOylation), | + | XopJ belongs to the group of YopJ-family effectors and is a member of the YopJ/AvrRxv family of SUMO peptidases and acetyltransferases. These are characterized as C55 cysteine proteases, ubiquitin-like proteases (deSUMOylation), |
=== Interaction partners === | === Interaction partners === | ||
- | 19S RP subunit RPT6 (RP ATPase 6) of the 26S proteasome (Üstün & Börnke, 2015). The interaction is dependent on the Walker A motif (ATP binding) of RPT6. | + | 19S RP subunit RPT6 (RP ATPase 6) of the 26S proteasome (Üstün & Börnke, 2015). The interaction is dependent on the Walker A motif (ATP binding) of RPT6. The interaction between the two proteins has been shown by yeast two-hybrid assays, //in vivo// and //in vitro// pull-down, as well as by bimolecular fluorescence assays //in planta// (Üstün et al., 2013). |
===== Conservation ===== | ===== Conservation ===== | ||
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Yes (//e.g.//, many // | Yes (//e.g.//, many // | ||
- | |||
===== References ===== | ===== References ===== | ||
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White F, Potnis N, Jones JB, Koebnik R (2009). The type III effectors of // | White F, Potnis N, Jones JB, Koebnik R (2009). The type III effectors of // | ||
+ | |||
+ | ===== Acknowledgements ===== | ||
+ | |||
+ | This fact sheet is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology). | ||