EuroXanth DokuWiki

User Tools

Site Tools

Trace:
bacteria:t3e:xopg

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
Next revision		Previous revision
bacteria:t3e:xopg [2023/05/24 08:31] – [References] rkoebnikbacteria:t3e:xopg [2025/02/18 22:41] (current) – jfpothier
Line 1: Line 1:
-====== XopG ======+====== The Type III Effector XopG from //Xanthomonas// ======
  
-Author: [[https://www.researchgate.net/profile/Camila_Fernandes2|Camila Ferdandes]]\\+Author: [[https://www.researchgate.net/profile/Camila_Fernandes2|Camila Fernandes]]\\
 Internal reviewer: [[https://www.researchgate.net/profile/Leonor_Martins|Leonor Martins]]\\ Internal reviewer: [[https://www.researchgate.net/profile/Leonor_Martins|Leonor Martins]]\\
-Expert reviewer: [[https://scholar.google.com/citations?user=YqEpuD0AAAAJ&hl=en|Neha Potnis]]+Expert reviewer: [[https://scholar.google.com/citations?user=YqEpuD0AAAAJ&hl=en|Neha Potnis]]\\
  
 Class: XopG\\ Class: XopG\\
-Family: XopG1, XopG2, XopG3\\+Families: XopG1, XopG2, XopG3\\
 Prototype: XCV1298 (XopG1) (//Xanthomonas euvesicatoria// pv. //euvesicatoria//, ex //Xanthomonas campestris// pv. //vesicatoria//; strain 85-10)\\ Prototype: XCV1298 (XopG1) (//Xanthomonas euvesicatoria// pv. //euvesicatoria//, ex //Xanthomonas campestris// pv. //vesicatoria//; strain 85-10)\\
 GenBank ID: [[https://www.ncbi.nlm.nih.gov/protein/CAJ22929.1|CAJ22929.1]] (213 aa)\\ GenBank ID: [[https://www.ncbi.nlm.nih.gov/protein/CAJ22929.1|CAJ22929.1]] (213 aa)\\
Line 16: Line 16:
 === How discovered? === === How discovered? ===
  
-XopG was identified based on homology searches using TBLASTN analysis. Known T3E proteins from plant and animal pathogens were used as query against all contigs of the draft genomes of //X. vesicatoria//, //X. gardneri// and //X. perforans// with e-value of 10<sup>-5 </sup>  (Potnis //et al//., 2011).+XopG was identified based on homology searches using TBLASTN analysis. Known T3E proteins from plant and animal pathogens were used as query against all contigs of the draft genomes of //X. vesicatoria//, //X. gardneri// and //X. perforans// with e-value of 10<sup>-5</sup>  (Potnis //et al//., 2011).
 === (Experimental) evidence for being a T3E === === (Experimental) evidence for being a T3E ===
  
Line 62: Line 62:
  
 White FF, Potnis N, Jones JB, Koebnik R (2009). The type III effectors of //Xanthomonas//. Mol. Plant Pathol.10: 749-766. DOI: [[https://doi.org/10.1111/j.1364-3703.2009.00590.x|10.1111/j.1364-3703.2009.00590.x]] White FF, Potnis N, Jones JB, Koebnik R (2009). The type III effectors of //Xanthomonas//. Mol. Plant Pathol.10: 749-766. DOI: [[https://doi.org/10.1111/j.1364-3703.2009.00590.x|10.1111/j.1364-3703.2009.00590.x]]
 +
 +===== Acknowledgements =====
 +
 +This fact sheet is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology).
  
bacteria/t3e/xopg.1684913464.txt.gz · Last modified: 2023/05/24 08:31 by rkoebnik

Page Tools

Except where otherwise noted, content on this wiki is licensed under the following license: CC Attribution-Share Alike 4.0 International
CC Attribution-Share Alike 4.0 International Donate Powered by PHP Valid HTML5 Valid CSS Driven by DokuWiki