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| bacteria:t3e:xope1 [2020/07/01 11:03] – old revision restored (2020/07/01 12:00) rkoebnik | bacteria:t3e:xope1 [2025/07/04 23:29] (current) – jfpothier | ||
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| - | ====== XopE1 ====== | + | ====== |
| - | Author: Jaime Cubero\\ | + | Author: |
| - | Internal reviewer: Ralf Koebnik\\ | + | Internal reviewer: |
| - | Expert reviewer: FIXME | + | |
| Class: XopE\\ | Class: XopE\\ | ||
| Family: XopE1\\ | Family: XopE1\\ | ||
| - | Prototype: XCV0294 (// | + | Prototype: XCV0294 (// |
| - | RefSeq | + | GenBank |
| + | RefSeq ID: [[https:// | ||
| Synonym: AvrXacE1 (// | Synonym: AvrXacE1 (// | ||
| - | 3D structure: | + | 3D structure: |
| ===== Biological function ===== | ===== Biological function ===== | ||
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| XopE1 was first identified by sequence homology searches (da Silva //et al//., 2002; Thieme //et al//., 2005). | XopE1 was first identified by sequence homology searches (da Silva //et al//., 2002; Thieme //et al//., 2005). | ||
| + | |||
| === (Experimental) evidence for being a T3E === | === (Experimental) evidence for being a T3E === | ||
| - | XopE1 fused to the AvrBs3 reporter was shown to be secreted into culture supernatants in a // | + | XopE1 fused to the AvrBs3 reporter was shown to be secreted into culture supernatants in a // |
| === Regulation === | === Regulation === | ||
| Using RT-PCR analyses, XopE1 from //X. euvesicatoria// | Using RT-PCR analyses, XopE1 from //X. euvesicatoria// | ||
| + | |||
| + | Transcriptome analysis (RNA-seq) and qRT-PCR revealed that // | ||
| + | |||
| === Phenotypes === | === Phenotypes === | ||
| - | // | + | // |
| === Localization === | === Localization === | ||
| - | XopE1 fused to gfp in a binary vector under control of the Cauliflower mosaic virus 35S promoter expressed in // | + | XopE1 fused to GFP reporter |
| === Enzymatic function === | === Enzymatic function === | ||
| - | XopE1 belongs to the HopX effector family, | + | XopE1 belongs to the HopX effector family, |
| === Interaction partners === | === Interaction partners === | ||
| - | XopE1 was found to physically interact with tomato 14-3-3s (TFT) and is also associated | + | XopE1 was found to physically interact with tomato 14-3-3s (TFT) (Dubrow //et al.//, 2018). In addition, XopE1 was predicted |
| ===== Conservation ===== | ===== Conservation ===== | ||
| === In xanthomonads === | === In xanthomonads === | ||
| - | Yes (//e.g.//, //X. citri, X. campestris, X. phaseoli, X. alfalfa, X. euvesicatoria//).\\ | + | |
| + | Yes (//e.g.//, //X. alfalfa, X. citri, X. euvesicatoria// | ||
| === In other plant pathogens/ | === In other plant pathogens/ | ||
| - | Yes (// | + | |
| + | Yes (// | ||
| ===== References ===== | ===== References ===== | ||
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| Thieme F, Szczesny R, Urban A, Kirchner O, Hause G, Bonas U (2007). New type III effectors from // | Thieme F, Szczesny R, Urban A, Kirchner O, Hause G, Bonas U (2007). New type III effectors from // | ||
| + | |||
| + | Wei C, Ding T, Chang C, Yu C, Li X, Liu Q (2019). Global regulator PhoP is necessary for motility, biofilm formation, exoenzyme production and virulence of // | ||
| + | |||
| + | ===== Acknowledgements ===== | ||
| + | |||
| + | This fact sheet is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology). | ||