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bacteria:t3e:xope1 [2020/07/01 11:02] – old revision restored (2020/07/01 11:54) rkoebnik | bacteria:t3e:xope1 [2025/07/04 23:29] (current) – jfpothier | ||
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- | ====== XopE1 ====== | + | ====== |
- | Author: Jaime Cubero\\ | + | Author: |
- | Internal reviewer: Ralf Koebnik\\ | + | Internal reviewer: |
- | Expert reviewer: FIXME | + | |
Class: XopE\\ | Class: XopE\\ | ||
Family: XopE1\\ | Family: XopE1\\ | ||
- | Prototype: XCV0294 (// | + | Prototype: XCV0294 (// |
- | RefSeq | + | GenBank |
+ | RefSeq ID: [[https:// | ||
Synonym: AvrXacE1 (// | Synonym: AvrXacE1 (// | ||
- | 3D structure: | + | 3D structure: |
===== Biological function ===== | ===== Biological function ===== | ||
=== How discovered? === | === How discovered? === | ||
+ | |||
XopE1 was first identified by sequence homology searches (da Silva //et al//., 2002; Thieme //et al//., 2005). | XopE1 was first identified by sequence homology searches (da Silva //et al//., 2002; Thieme //et al//., 2005). | ||
=== (Experimental) evidence for being a T3E === | === (Experimental) evidence for being a T3E === | ||
- | XopE1 fused to the AvrBs3 reporter, was shown to translocate | + | |
+ | XopE1 fused to the AvrBs3 reporter was shown to be secreted into culture supernatants in a // | ||
=== Regulation === | === Regulation === | ||
- | XopE1 from //X. euvesicatoria// | + | |
+ | Using RT-PCR analyses, | ||
+ | |||
+ | Transcriptome analysis (RNA-seq) | ||
=== Phenotypes === | === Phenotypes === | ||
- | // | + | |
- | XopE1 mutants | + | // |
=== Localization === | === Localization === | ||
- | XopE1 fused to gfp in a binary vector under control of the Cauliflower mosaic virus 35S promoter expressed in // | + | |
+ | XopE1 fused to GFP reporter | ||
=== Enzymatic function === | === Enzymatic function === | ||
- | XopE1 belongs to the HopX effector family, | + | |
+ | XopE1 belongs to the HopX effector family, | ||
=== Interaction partners === | === Interaction partners === | ||
- | XopE1 was found to physically interact with tomato 14-3-3s (TFT) and is also associated | + | |
+ | XopE1 was found to physically interact with tomato 14-3-3s (TFT) (Dubrow //et al.//, 2018). In addition, XopE1 was predicted | ||
===== Conservation ===== | ===== Conservation ===== | ||
=== In xanthomonads === | === In xanthomonads === | ||
- | Yes (//e.g.//, //X. citri, X. campestris, X. phaseoli, X. alfalfa, X. euvesicatoria//).\\ | + | |
+ | Yes (//e.g.//, //X. alfalfa, X. citri, X. euvesicatoria// | ||
=== In other plant pathogens/ | === In other plant pathogens/ | ||
- | Yes (// | + | |
+ | Yes (// | ||
===== References ===== | ===== References ===== | ||
Line 61: | Line 71: | ||
Thieme F, Szczesny R, Urban A, Kirchner O, Hause G, Bonas U (2007). New type III effectors from // | Thieme F, Szczesny R, Urban A, Kirchner O, Hause G, Bonas U (2007). New type III effectors from // | ||
+ | |||
+ | Wei C, Ding T, Chang C, Yu C, Li X, Liu Q (2019). Global regulator PhoP is necessary for motility, biofilm formation, exoenzyme production and virulence of // | ||
+ | |||
+ | ===== Acknowledgements ===== | ||
+ | |||
+ | This fact sheet is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology). | ||