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bacteria:t3e:xopba

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bacteria:t3e:xopba [2023/02/16 13:04] – [Biological function] rkoebnikbacteria:t3e:xopba [2024/12/16 14:51] (current) – [The Type III Effector XopBA from //Xanthomonas//] rkoebnik
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-====== XopAU ======+====== The Type III Effector XopBA from //Xanthomonas// ======
  
-Author: [[https://www.researchgate.net/profile/Ralf-Koebnik|Ralf Koebnik]]\\ +Author: [[https://www.researchgate.net/profile/Ralf-Koebnik|Ralf Koebnik]]
-Internal reviewer:\\ +
-Expert reviewer:+
  
 Class: XopBA\\ Class: XopBA\\
 Family: XopBA\\ Family: XopBA\\
-Prototype: XopBA (//Xanthomonas euvesicatoria// pv. //euvesicatoria// strain 66b)\\ +Prototype: XopBA (//Xanthomonas euvesicatoria// pv. //euvesicatoria//; strain 66b)\\ 
-RefSeq ID: [[https://www.ncbi.nlm.nih.gov/protein/WP_041855031.1|WP_227478587.1]] (500 aa)\\+RefSeq ID: [[https://www.ncbi.nlm.nih.gov/protein/WP_227478587.1|WP_227478587.1]] (500 aa)\\
 3D structure: Unknown 3D structure: Unknown
  
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 === How discovered? === === How discovered? ===
  
-XopAU was discovered by homology to HopW/HopPmaA in //Pseudomonas syringae// (70% aa sequence identity) and EspW in //Escherichia coli// (30% aa sequence identity) (Stavrinides & Guttman, 2004; Sandu et al., 2017).+XopBA was discovered by homology to HopW/HopPmaA in //Pseudomonas syringae// (70% aa sequence identity) and EspW in //Escherichia coli// (30% aa sequence identity) (Stavrinides & Guttman, 2004; Sandu et al., 2017).
 === (Experimental) evidence for being a T3E === === (Experimental) evidence for being a T3E ===
  
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 === Phenotypes === === Phenotypes ===
  
-Ectopic expression of the distant homolog in //E. coli//, EspW, results in formation of unique membrane protrusions (Sandu et al., 2017)+Ectopic expression of the distant homolog in //E. coli//, EspW, results in formation of unique membrane protrusions (Sandu //et al.//, 2017)
 === Localization === === Localization ===
  
-The distant homolog in //E. coli//, EspW, and Kif15 colocalized in cotransfected cells, while ectopically expressed Kif15 localized to the actin pedestals following EHEC infection (Sandu et al., 2017).+The distant homolog in //E. coli//, EspW, and Kif15 colocalized in cotransfected cells, while ectopically expressed Kif15 localized to the actin pedestals following EHEC infection (Sandu //et al.//, 2017).
 === Enzymatic function === === Enzymatic function ===
  
-The distant homolog in //E. coli//, EspW, modulates actin dynamics in a Rac1-dependent manner (Sandu et al., 2017).+The distant homolog in //E. coli//, EspW, modulates actin dynamics in a Rac1-dependent manner (Sandu //et al.//, 2017).
 === Interaction partners === === Interaction partners ===
  
-The distant homolog in //E. coli//, EspW, was found to interact with the motor protein Kif15 in a yeast two-hybrid screen (Sandu et al., 2017).+The distant homolog in //E. coli//, EspW, was found to interact with the motor protein Kif15 in a yeast two-hybrid screen (Sandu //et al.//, 2017).
  
 ===== Conservation ===== ===== Conservation =====
bacteria/t3e/xopba.1676552674.txt.gz · Last modified: 2023/02/16 13:04 by rkoebnik

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