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bacteria:t3e:xopax

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bacteria:t3e:xopax [2020/07/09 13:15] – [References] rkoebnikbacteria:t3e:xopax [2025/02/12 23:44] (current) – jfpothier
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-====== XopAX ======+====== The Type III Effector XopAX from //Xanthomonas// ======
  
-Author: John Doe\\ +Author: [[https://www.researchgate.net/profile/Doron_Teper|Doron Teper]]
-Reviewer: Jane Doe+
  
 Class: XopAX\\ Class: XopAX\\
 Family: XopAX\\ Family: XopAX\\
-Prototype: Xop? (//Xanthomonas//; strain)\\ +Prototype: XCVd0086 (//Xanthomonas euvesicatoria// pv. //euvesicatoria//, ex //Xanthomonas campestris// pv. //vesicatoria//; strain 85-10)\\ 
-RefSeq ID:\\+GenBank ID: [[https://www.ncbi.nlm.nih.gov/protein/CAJ19898.1|CAJ19898.1]] (383 aa)\\ 
 +RefSeq ID: [[https://www.ncbi.nlm.nih.gov/protein/WP_041854960.1|WP_041854960.1]] (353 aa)\\
 3D structure: Unknown 3D structure: Unknown
  
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 === How discovered? === === How discovered? ===
  
 +XopAX (XCVd0086 in //X. euvesicatoria// strain 85-10; GenBank [[https://www.ncbi.nlm.nih.gov/protein/78033899|CAJ19898]]) was discovered using a machine-learning approach (Teper //et al//., 2016).
 === (Experimental) evidence for being a T3E === === (Experimental) evidence for being a T3E ===
  
 +XopAX fused to the AvrBs2 reporter was shown to translocate into plant cells in an //hrpF//-dependent manner (Teper //et al//., 2016).
 === Regulation === === Regulation ===
 +
 +Unknown.
  
 === Phenotypes === === Phenotypes ===
 +
 +Unknown.
  
 === Localization === === Localization ===
 +
 +Unknown.
  
 === Enzymatic function === === Enzymatic function ===
 +
 +Unknown.
  
 === Interaction partners === === Interaction partners ===
 +
 +Unknown.
  
 ===== Conservation ===== ===== Conservation =====
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 === In xanthomonads === === In xanthomonads ===
  
 +Yes (//X. euvevsicatoria//, //X. campestris// pv. //campestris//, //X. arboricola//).
 === In other plant pathogens/symbionts === === In other plant pathogens/symbionts ===
  
 +Yes (//Pseudomonas syringae// pv. //aceris//).
 ===== References ===== ===== References =====
  
 Teper D, Burstein D, Salomon D, Gershovitz M, Pupko T, Sessa G (2016). Identification of novel //Xanthomonas euvesicatoria// type III effector proteins by a machine-learning approach. Mol. Plant Pathol. 17: 398-411. DOI: [[https://doi.org/10.1111/mpp.12288|10.1111/mpp.12288]] Teper D, Burstein D, Salomon D, Gershovitz M, Pupko T, Sessa G (2016). Identification of novel //Xanthomonas euvesicatoria// type III effector proteins by a machine-learning approach. Mol. Plant Pathol. 17: 398-411. DOI: [[https://doi.org/10.1111/mpp.12288|10.1111/mpp.12288]]
 +
 +===== Acknowledgements =====
 +
 +This fact sheet is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology).
  
bacteria/t3e/xopax.1594296943.txt.gz · Last modified: 2023/01/09 10:20 (external edit)

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