EuroXanth DokuWiki

User Tools

Site Tools

Trace: • xopp
bacteria:t3e:xopax

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Next revision		Previous revision
bacteria:t3e:xopax [2020/07/09 10:45] – created rkoebnikbacteria:t3e:xopax [2025/07/04 23:20] (current) – jfpothier
Line 1: Line 1:
-====== XopAA ======+====== The Type III Effector XopAX from //Xanthomonas// ======
  
-Author: John Doe\\ +Author: [[https://www.researchgate.net/profile/Doron_Teper|Doron Teper]]\\
-Reviewer: Jane Doe+
  
-Class: XopAA\\ +Class: XopAX\\ 
-Family: XopAA\\ +Family: XopAX\\ 
-Prototype: Xop? (//Xanthomonas//; strain)\\ +Prototype: XCVd0086 (//Xanthomonas euvesicatoria// pv. //euvesicatoria//, ex //Xanthomonas campestris// pv. //vesicatoria//; strain 85-10)\\ 
-RefSeq ID:\\+GenBank ID: [[https://www.ncbi.nlm.nih.gov/protein/CAJ19898.1|CAJ19898.1]] (383 aa)\\ 
 +RefSeq ID: [[https://www.ncbi.nlm.nih.gov/protein/WP_041854960.1|WP_041854960.1]] (353 aa)\\
 3D structure: Unknown 3D structure: Unknown
  
Line 13: Line 13:
  
 === How discovered? === === How discovered? ===
 +
 +XopAX (XCVd0086 in //X. euvesicatoria// strain 85-10; GenBank [[https://www.ncbi.nlm.nih.gov/protein/78033899|CAJ19898]]) was discovered using a machine-learning approach (Teper //et al//., 2016).
  
 === (Experimental) evidence for being a T3E === === (Experimental) evidence for being a T3E ===
 +
 +XopAX fused to the AvrBs2 reporter was shown to translocate into plant cells in an //hrpF//-dependent manner (Teper //et al//., 2016).
  
 === Regulation === === Regulation ===
 +
 +Unknown.
  
 === Phenotypes === === Phenotypes ===
 +
 +Unknown.
  
 === Localization === === Localization ===
 +
 +Unknown.
  
 === Enzymatic function === === Enzymatic function ===
 +
 +Unknown.
  
 === Interaction partners === === Interaction partners ===
 +
 +Unknown.
  
 ===== Conservation ===== ===== Conservation =====
  
 === In xanthomonads === === In xanthomonads ===
 +
 +Yes (//X. euvevsicatoria//, //X. campestris// pv. //campestris//, //X. arboricola//).
  
 === In other plant pathogens/symbionts === === In other plant pathogens/symbionts ===
 +
 +Yes (//Pseudomonas syringae// pv. //aceris//).
  
 ===== References ===== ===== References =====
 +
 +Teper D, Burstein D, Salomon D, Gershovitz M, Pupko T, Sessa G (2016). Identification of novel //Xanthomonas euvesicatoria// type III effector proteins by a machine-learning approach. Mol. Plant Pathol. 17: 398-411. DOI: [[https://doi.org/10.1111/mpp.12288|10.1111/mpp.12288]]
 +
 +===== Acknowledgements =====
 +
 +This fact sheet is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology).
  
bacteria/t3e/xopax.1594287941.txt.gz · Last modified: 2023/01/09 10:20 (external edit)

Page Tools

Except where otherwise noted, content on this wiki is licensed under the following license: CC Attribution-Share Alike 4.0 International
CC Attribution-Share Alike 4.0 International Donate Powered by PHP Valid HTML5 Valid CSS Driven by DokuWiki