bacteria:t3e:xopat
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| bacteria:t3e:xopat [2023/10/03 07:56] – [XopAT] rkoebnik | bacteria:t3e:xopat [2025/02/12 23:43] (current) – jfpothier | ||
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| - | ====== XopAT ====== | + | ====== |
| - | Author: [[https:// | + | Author: [[https:// |
| - | Internal reviewer: | + | |
| - | Expert reviewer: **WANTED!** | + | |
| Class: XopAT\\ | Class: XopAT\\ | ||
| Line 18: | Line 16: | ||
| //xopAT// was predicted as a novel type 3 effector (T3E) gene because of four criteria (Bogdanove //et al.//, 2011): | //xopAT// was predicted as a novel type 3 effector (T3E) gene because of four criteria (Bogdanove //et al.//, 2011): | ||
| - | - The gene is encoded next to the // | + | |
| - | - The gene contains a plant-inducible promoter (PIP) box and a properly positioned | + | - The gene contains a plant-inducible promoter (PIP) box and a properly positioned |
| - | - Like other T3E genes, // | + | - Like other T3E genes, //xopAT// has an unusual (low) G+C content suggestive of acquisition by horizontal gene transfer. |
| - In common with other T3Es, the encoded protein contains eukaryotic motifs for myristoylation and palmitoylation. | - In common with other T3Es, the encoded protein contains eukaryotic motifs for myristoylation and palmitoylation. | ||
bacteria/t3e/xopat.1696316202.txt.gz · Last modified: 2023/10/03 07:56 by rkoebnik
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