EuroXanth DokuWiki

User Tools

Site Tools

Trace:
bacteria:t3e:xopar

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
Next revision		Previous revision
bacteria:t3e:xopar [2020/07/09 13:07] – [References] rkoebnikbacteria:t3e:xopar [2024/12/16 14:46] (current) – [The Type III Effector XopAR from //Xanthomonas//] rkoebnik
Line 1: Line 1:
-====== XopAR ======+====== The Type III Effector XopAR from //Xanthomonas// ======
  
-Author: John Doe\\ +Author: [[https://www.researchgate.net/profile/Ralf-Koebnik|Ralf Koebnik]]
-Reviewer: Jane Doe+
  
 Class: XopAR\\ Class: XopAR\\
 Family: XopAR\\ Family: XopAR\\
-Prototype: Xop? (//Xanthomonas//; strain)\\ +Prototype: XVE_3216 (//Xanthomonas vesicatoria//; strain 1111 = ATCC 35937)\\ 
-RefSeq ID:\\+GenBank ID: [[https://www.ncbi.nlm.nih.gov/protein/EGD08505.1|EGD08505.1]] (132 aa)\\ 
 +RefSeq ID: Not available\\
 3D structure: Unknown 3D structure: Unknown
  
Line 14: Line 14:
 === How discovered? === === How discovered? ===
  
 +XopAR was predicted to be a type 3 effector based on homology to Rip10, a type 3 effector from //Ralstonia solanacearum// (Mukaihara //et al.//, 2010; Potnis //et al.//, 2011).
 === (Experimental) evidence for being a T3E === === (Experimental) evidence for being a T3E ===
  
Line 33: Line 34:
  
 ===== References ===== ===== References =====
 +
 +Mukaihara T, Tamura N, Iwabuchi M (2010). Genome-wide identification of a large repertoire of //Ralstonia solanacearum// type III effector proteins by a new functional screen. Mol. Plant Microbe Interact. 23: 251-262. DOI: [[https://doi.org/10.1094/MPMI-23-3-0251|10.1094/MPMI-23-3-0251]]
  
 Potnis N, Krasileva K, Chow V, Almeida NF, Patil PB, Ryan RP, Sharlach M, Behlau F, Dow JM, Momol M, White FF, Preston JF, Vinatzer BA, Koebnik R, Setubal JC, Norman DJ, Staskawicz BJ, Jones JB (2011). Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper. BMC Genomics 12: 146. DOI: [[https://doi.org/10.1186/1471-2164-12-146|10.1186/1471-2164-12-146]] Potnis N, Krasileva K, Chow V, Almeida NF, Patil PB, Ryan RP, Sharlach M, Behlau F, Dow JM, Momol M, White FF, Preston JF, Vinatzer BA, Koebnik R, Setubal JC, Norman DJ, Staskawicz BJ, Jones JB (2011). Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper. BMC Genomics 12: 146. DOI: [[https://doi.org/10.1186/1471-2164-12-146|10.1186/1471-2164-12-146]]
  
bacteria/t3e/xopar.1594296442.txt.gz · Last modified: 2023/01/09 10:20 (external edit)

Page Tools

Except where otherwise noted, content on this wiki is licensed under the following license: CC Attribution-Share Alike 4.0 International
CC Attribution-Share Alike 4.0 International Donate Powered by PHP Valid HTML5 Valid CSS Driven by DokuWiki