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--- bacteria:t3e:xopar [2020/07/09 10:43] – rkoebnik
+++ bacteria:t3e:xopar [2024/12/16 14:46] (current) – [The Type III Effector XopAR from //Xanthomonas//] rkoebnik
@@ Line 1: / Line 1: @@
-====== XopAR ======
+====== The Type III Effector XopAR from //Xanthomonas// ======
-Author: John Doe\\
+Author: [[https://www.researchgate.net/profile/Ralf-Koebnik|Ralf Koebnik]]
-Reviewer: Jane Doe
 Class: XopAR\\
 Family: XopAR\\
-Prototype: Xop? (//Xanthomonas//; strain)\\
+Prototype: XVE_3216 (//Xanthomonas vesicatoria//; strain 1111 = ATCC 35937)\\
-RefSeq ID:\\
+GenBank ID: [[https://www.ncbi.nlm.nih.gov/protein/EGD08505.1|EGD08505.1]] (132 aa)\\
+RefSeq ID: Not available\\
 D structure: Unknown
@@ Line 14: / Line 14: @@
 === How discovered? ===
+XopAR was predicted to be a type 3 effector based on homology to Rip10, a type 3 effector from //Ralstonia solanacearum// (Mukaihara //et al.//, 2010; Potnis //et al.//, 2011).
 === (Experimental) evidence for being a T3E ===
@@ Line 33: / Line 34: @@
 ===== References =====
+Mukaihara T, Tamura N, Iwabuchi M (2010). Genome-wide identification of a large repertoire of //Ralstonia solanacearum// type III effector proteins by a new functional screen. Mol. Plant Microbe Interact. 23: 251-262. DOI: [[https://doi.org/10.1094/MPMI-23-3-0251|10.1094/MPMI-23-3-0251]]
+Potnis N, Krasileva K, Chow V, Almeida NF, Patil PB, Ryan RP, Sharlach M, Behlau F, Dow JM, Momol M, White FF, Preston JF, Vinatzer BA, Koebnik R, Setubal JC, Norman DJ, Staskawicz BJ, Jones JB (2011). Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper. BMC Genomics 12: 146. DOI: [[https://doi.org/10.1186/1471-2164-12-146|10.1186/1471-2164-12-146]]

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