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bacteria:t3e:xopao

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bacteria:t3e:xopao [2020/07/09 10:40] – created rkoebnikbacteria:t3e:xopao [2024/12/16 14:45] (current) – [The Type III Effector XopAO from //Xanthomonas//] rkoebnik
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-====== XopAA ======+====== The Type III Effector XopAO from //Xanthomonas// ======
  
-Author: John Doe\\ +Author: [[https://www.researchgate.net/profile/Ralf-Koebnik|Ralf Koebnik]]
-Reviewer: Jane Doe+
  
-Class: XopAA\\ +Class: XopAO\\ 
-Family: XopAA\\ +Family: XopAO\\ 
-Prototype: Xop? (//Xanthomonas//; strain)\\ +Prototype: XGA_1250 (//Xanthomonas hortorum// pv. //gardneri//, ex. //Xanthomonas gardneri//; strain 101 = ATCC 19865)\\ 
-RefSeq ID:\\+GenBank ID: [[https://www.ncbi.nlm.nih.gov/protein/EGD20072.1|EGD20072.1]] (206 aa)\\ 
 +RefSeq ID: [[https://www.ncbi.nlm.nih.gov/protein/WP_162267513.1|WP_162267513.1]] (207 aa)\\
 3D structure: Unknown 3D structure: Unknown
  
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 === How discovered? === === How discovered? ===
  
 +XopAO was predicted to be a type 3 effector based on homology to AvrRpm1, a type 3 effector from //Pseudomonas syringae// (Potnis //et al.//, 2011).
 === (Experimental) evidence for being a T3E === === (Experimental) evidence for being a T3E ===
  
 +T3SS-mediated translocation of XopAO was assessed by constructing fusion genes with the C-terminal end of AvrBs2 coding sequence (//avrBs2// <sub>62-574</sub>) in a race 6 strain of //X. euvesicatoria//. Translocation was measured in pepper cv. ECW 20R, containing the resistance gene //Bs2//. //xopAO// was demonstrated to direct AvrBs2-specific hypersensitive reactions in ECW 20R (Potnis //et al.//, 2011).
 === Regulation === === Regulation ===
  
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 ===== References ===== ===== References =====
 +
 +Potnis N, Krasileva K, Chow V, Almeida NF, Patil PB, Ryan RP, Sharlach M, Behlau F, Dow JM, Momol M, White FF, Preston JF, Vinatzer BA, Koebnik R, Setubal JC, Norman DJ, Staskawicz BJ, Jones JB (2011). Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper. BMC Genomics 12: 146. DOI: [[https://doi.org/10.1186/1471-2164-12-146|10.1186/1471-2164-12-146]]
  
bacteria/t3e/xopao.1594287646.txt.gz · Last modified: 2023/01/09 10:20 (external edit)

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