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bacteria:t3e:xopal2 [2023/01/09 10:20] – external edit 127.0.0.1bacteria:t3e:xopal2 [2025/02/24 09:43] (current) – jensboch
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-====== XopAL2 ======+====== The Type III Effector XopAL2 from //Xanthomonas// ======
  
 Author: [[https://www.researchgate.net/profile/Matthieu_Arlat|Matthieu Arlat]]\\ Author: [[https://www.researchgate.net/profile/Matthieu_Arlat|Matthieu Arlat]]\\
-Internal reviewer: [[https://www.researchgate.net/profile/Ralf_Koebnik|Ralf Koebnik]]\\ +Internal reviewer: [[https://www.researchgate.net/profile/Ralf_Koebnik|Ralf Koebnik]]
-Expert reviewer: FIXME+
  
 Class: XopAL\\ Class: XopAL\\
 Family: XopAL2\\ Family: XopAL2\\
-Prototype: XopAL2 (//Xanthomonas// campestris pv. //campestris// B100, gene //Xb100_0616//; Vorhölter //et al//., 2008)\\ +Prototype: XopAL2 (//Xanthomonas campestris// pv. //campestris//; strain B100) (Vorhölter //et al.//, 2008)\\ 
-RefSeq ID: [[https://www.ncbi.nlm.nih.gov/protein/CAP49952.1|CAP49952.1]] (293 aa)\\+GenBank ID: [[https://www.ncbi.nlm.nih.gov/protein/CAP49952.1|CAP49952.1]] (293 aa)\\ 
 +RefSeq ID: [[https://www.ncbi.nlm.nih.gov/protein/WP_012437264.1|WP_012437264.1]] (293 aa)\\
 3D structure: Unknown 3D structure: Unknown
  
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 === Regulation === === Regulation ===
  
-Presence of a putative PIP box in the promoter region (Matthieu Arlat, personnal communication).+Presence of a putative PIP box in the promoter region (Matthieu Arlat, personal communication).
  
 === Phenotypes === === Phenotypes ===
  
-XopAL2 was found to be associated with variations in disease symptoms when testing a set of 45 //X. campestris //pv. //campestris// strains on two Arabidopsis natural accessions (Guy //et al.//, 2013).+XopAL2 was found to be associated with variations in disease symptoms when testing a set of 45 //X. campestris// pv. //campestris// strains on two Arabidopsis natural accessions (Guy //et al.//, 2013).
 === Localization === === Localization ===
  
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 Vorhölter FJ, Schneiker S, Goesmann A, Krause L, Bekel T, Kaiser O, Linke B, Patschkowski T, Rückert C, Schmid J, Sidhu VK, Sieber V, Tauch A, Watt SA, Weisshaar B, Becker A, Niehaus K, Pühler A (2008). The genome of //Xanthomonas campestris// pv. //campestris// B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis. J Biotechnol. 134: 33-45. DOI: [[https://doi.org/10.1016/j.jbiotec.2007.12.013|https://doi.org/10.1016/j.jbiotec.2007.12.013]]. Vorhölter FJ, Schneiker S, Goesmann A, Krause L, Bekel T, Kaiser O, Linke B, Patschkowski T, Rückert C, Schmid J, Sidhu VK, Sieber V, Tauch A, Watt SA, Weisshaar B, Becker A, Niehaus K, Pühler A (2008). The genome of //Xanthomonas campestris// pv. //campestris// B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis. J Biotechnol. 134: 33-45. DOI: [[https://doi.org/10.1016/j.jbiotec.2007.12.013|https://doi.org/10.1016/j.jbiotec.2007.12.013]].
 +
 +===== Acknowledgements =====
 +
 +This fact sheet is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology).
  
bacteria/t3e/xopal2.1673259603.txt.gz · Last modified: 2023/01/09 10:20 by 127.0.0.1

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