Differences

This shows you the differences between two versions of the page.

--- bacteria:t3e:xopaf [2020/07/09 11:45] – [Further reading] rkoebnik
+++ bacteria:t3e:xopaf [2025/02/12 23:16] (current) – jfpothier
@@ Line 1: / Line 1: @@
-====== XopAF ======
+====== The Type III Effector XopAF from //Xanthomonas// ======
 Author: [[https://www.researchgate.net/profile/Tamas_Kovacs6|Tamás Kovács]]\\
-Internal reviewer: [[https://www.researchgate.net/profile/Guido_Sessa|Guido Sessa]]\\
+Internal reviewer: [[https://www.researchgate.net/profile/Guido_Sessa|Guido Sessa]]
-Expert reviewer: FIXME
 Class: XopAF\\
-Family: XopAF\\
+Families: XopAF1, XopAF2\\
-Prototype: AvrXv3 (//Xanthomonas euvesicatoria //pv.// perforans//)\\
+Prototype: AvrXv3 (//Xanthomonas euvesicatoria// pv. //perforans//; strain T3)\\
-RefSeq ID: [[https://www.ncbi.nlm.nih.gov/protein/|WP_145590005.1]] (218 aa)\\
+GenBank ID (XopAF1): [[https://www.ncbi.nlm.nih.gov/protein/AAG18480.1|AAG18480.1]] (218 aa)\\
+RefSeq ID (XopAF1): [[https://www.ncbi.nlm.nih.gov/protein/WP_008577605.1|WP_008577605.1]] (218 aa)\\
+RefSeq ID (XopAF2): [[https://www.ncbi.nlm.nih.gov/protein/WP_227479740.1|WP_227479740.1]] (286 aa)\\
 Synonym: AvrXv3\\
 D structure: Unknown
@@ Line 36: / Line 37: @@
 Tomato RxvT3 resistance protein (has not been identified yet).
-=====   =====
 ===== Conservation =====
@@ Line 47: / Line 46: @@
 Yes (//Pseudomonas, Acidovorax//, //Ralstonia// spp.) (Washington //et al//., 2016).
 ===== References =====
@@ Line 64: / Line 62: @@
 Gibly A, Bonshtien A, Balaji V, Debbie P, Martin GB, Sessa G (2004). Identification and expression profiling of tomato genes differentially regulated during a resistance response to //Xanthomonas campestris// pv. //vesicatoria//. Mol. Plant Microbe Interact. 17: 1212-1222. DOI: [[https://doi.org/10.1094/MPMI.2004.17.11.1212|10.1094/MPMI.2004.17.11.1212]]
-Jalan N, Kumar D, Andrade MO, Yu F, Jones JB, Graham JH, White FF, Setubal JC, Wang N (2013). Comparative genomic and transcriptome analyses of pathotypes of //Xanthomonas citri //subsp. //citri// provide insights into mechanisms of bacterial virulence and host range. BMC Genomics 14: 551. DOI: [[https://doi.org/10.1186/1471-2164-14-551|10.1186/1471-2164-14-551]]
+Jalan N, Kumar D, Andrade MO, Yu F, Jones JB, Graham JH, White FF, Setubal JC, Wang N (2013). Comparative genomic and transcriptome analyses of pathotypes of //Xanthomonas citri// subsp. //citri// provide insights into mechanisms of bacterial virulence and host range. BMC Genomics 14: 551. DOI: [[https://doi.org/10.1186/1471-2164-14-551|10.1186/1471-2164-14-551]]
 Timilsina S, Abrahamian P, Potnis N, Minsavage GV, White FF, Staskawicz BJ, Jones JB, Vallad GE, Goss EM (2016). Analysis of sequenced genomes of //Xanthomonas perforans// identifies candidate targets for resistance breeding in tomato. Phytopathology 106: 1097-1104. DOI: [[https://doi.org/10.1094/PHYTO-03-16-0119-FI|10.1094/PHYTO-03-16-0119-FI]]
+===== Acknowledgements =====
+This fact sheet is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology).

EuroXanth DokuWiki

User Tools

Site Tools

Differences

Page Tools