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bacteria:t3e:xopaf [2020/07/04 05:54] – [Conservation] guidosbacteria:t3e:xopaf [2025/02/12 23:16] (current) – jfpothier
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-====== XopAF ======+====== The Type III Effector XopAF from //Xanthomonas// ======
  
 Author: [[https://www.researchgate.net/profile/Tamas_Kovacs6|Tamás Kovács]]\\ Author: [[https://www.researchgate.net/profile/Tamas_Kovacs6|Tamás Kovács]]\\
-Internal reviewer: [[https://www.researchgate.net/profile/Guido_Sessa|Guido Sessa]]\\ +Internal reviewer: [[https://www.researchgate.net/profile/Guido_Sessa|Guido Sessa]]
-Expert reviewer: FIXME+
  
 Class: XopAF\\ Class: XopAF\\
-Family: XopAF\\ +Families: XopAF1, XopAF2\\ 
-Prototype: AvrXv3 (//Xanthomonas euvesicatoria //pv.// perforans//)\\ +Prototype: AvrXv3 (//Xanthomonas euvesicatoria// pv. //perforans//; strain T3)\\ 
-RefSeq ID: [[https://www.ncbi.nlm.nih.gov/protein/|WP_145590005.1]] (218 aa)\\+GenBank ID (XopAF1): [[https://www.ncbi.nlm.nih.gov/protein/AAG18480.1|AAG18480.1]] (218 aa)\\ 
 +RefSeq ID (XopAF1): [[https://www.ncbi.nlm.nih.gov/protein/WP_008577605.1|WP_008577605.1]] (218 aa)\\ 
 +RefSeq ID (XopAF2): [[https://www.ncbi.nlm.nih.gov/protein/WP_227479740.1|WP_227479740.1]] (286 aa)\\ 
 +Synonym: AvrXv3\\
 3D structure: Unknown 3D structure: Unknown
  
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 Tomato RxvT3 resistance protein (has not been identified yet). Tomato RxvT3 resistance protein (has not been identified yet).
- 
-=====   ===== 
  
 ===== Conservation ===== ===== Conservation =====
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 === In xanthomonads === === In xanthomonads ===
  
-Yes (//e.g.//, //X. alfalfae, X. translucens, X. citri//) (Washington //et al//., 2016).+Yes (//e.g.//, //X. alfalfae//, //X. citri//, //X. translucens//) (Washington //et al//., 2016).
 === In other plant pathogens/symbionts === === In other plant pathogens/symbionts ===
  
 Yes (//Pseudomonas, Acidovorax//, //Ralstonia// spp.) (Washington //et al//., 2016). Yes (//Pseudomonas, Acidovorax//, //Ralstonia// spp.) (Washington //et al//., 2016).
- 
 ===== References ===== ===== References =====
  
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 Washington EJ, Mukhtar MS, Finkel MO, Wan L, Banfield JM, Kieber JJ, Dangl LJ (2016). //Pseudomonas syringae// type III effector HopAF1 suppresses plant immunity by targeting methionine recycling to block ethylene induction. Proc. Natl. Acad. Sci. USA. 113: E3577-E3586. DOI: [[https://doi.org/10.1073/pnas.1606322113|10.1073/pnas.1606322113]] Washington EJ, Mukhtar MS, Finkel MO, Wan L, Banfield JM, Kieber JJ, Dangl LJ (2016). //Pseudomonas syringae// type III effector HopAF1 suppresses plant immunity by targeting methionine recycling to block ethylene induction. Proc. Natl. Acad. Sci. USA. 113: E3577-E3586. DOI: [[https://doi.org/10.1073/pnas.1606322113|10.1073/pnas.1606322113]]
  
 +===== Further reading =====
 +
 +Gibly A, Bonshtien A, Balaji V, Debbie P, Martin GB, Sessa G (2004). Identification and expression profiling of tomato genes differentially regulated during a resistance response to //Xanthomonas campestris// pv. //vesicatoria//. Mol. Plant Microbe Interact. 17: 1212-1222. DOI: [[https://doi.org/10.1094/MPMI.2004.17.11.1212|10.1094/MPMI.2004.17.11.1212]]
 +
 +Jalan N, Kumar D, Andrade MO, Yu F, Jones JB, Graham JH, White FF, Setubal JC, Wang N (2013). Comparative genomic and transcriptome analyses of pathotypes of //Xanthomonas citri// subsp. //citri// provide insights into mechanisms of bacterial virulence and host range. BMC Genomics 14: 551. DOI: [[https://doi.org/10.1186/1471-2164-14-551|10.1186/1471-2164-14-551]]
 +
 +Timilsina S, Abrahamian P, Potnis N, Minsavage GV, White FF, Staskawicz BJ, Jones JB, Vallad GE, Goss EM (2016). Analysis of sequenced genomes of //Xanthomonas perforans// identifies candidate targets for resistance breeding in tomato. Phytopathology 106: 1097-1104. DOI: [[https://doi.org/10.1094/PHYTO-03-16-0119-FI|10.1094/PHYTO-03-16-0119-FI]]
 +
 +===== Acknowledgements =====
 +
 +This fact sheet is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology).
  
bacteria/t3e/xopaf.1593838476.txt.gz · Last modified: 2023/01/09 10:20 (external edit)

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